RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HOXB9P17482 250 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-214ENST00000477152 ADRA2CP18825 462 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 FUT1P19526 365 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 PEX2P28328 305 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 PCGF2P35227 344 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 ARFIP2P53365 341 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 RAP1BP61224 184 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 RAP1AP62834 184 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 CD47Q08722 323 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 NFYCQ13952 458 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 MELKQ14680 651 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 ARMCX4Q5H9R4 360 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 PAGE3Q5JUK9 113 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 THEM4Q5T1C6 240 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 C10orf128Q5T292 105 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 AVPI1Q5T686 147 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 LRRC18Q8N456 261 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 DPP10Q8N608 796 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 OR6T1Q8NGN1 323 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 CCL17Q92583 94 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 TLCD1Q96CP7 247 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 CGREF1Q99674 301 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 CPPED1Q9BRF8 314 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-214ENST00000477152 ALG12Q9BV10 488 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 PCDHAC1Q9H158 963 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 OR51B6Q9H340 312 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 WIPI2Q9Y4P8 454 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 TIMM10BQ9Y5J6 103 aa6.17□□□□□ -1.42
BRCA1-214ENST00000477152 LOC105371242A0A075B767 164 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 TRBV5-3A0A0A0MS03 114 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 LRRN3E7EW58 273 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 KPNA4O00629 521 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-214ENST00000477152 SPRY3O43610 288 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 OR7A10O76100 309 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 OR5F1O95221 314 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 CLPTM1O96005 669 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 NPPAP01160 153 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 ADH4P08319 380 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 PATE4P0C8F1 98 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 MTNR1AP48039 350 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 SGCAQ16586 387 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 HIST3H3Q16695 136 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 DUSP7Q16829 419 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 PABPC1L2AQ5JQF8 200 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 SLC27A4Q6P1M0 643 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 NHLRC1Q6VVB1 395 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 MAVSQ7Z434 540 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF584Q8IVC4 421 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 FUNDC1Q8IVP5 155 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 MUC20Q8N307 709 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-214ENST00000477152 IPCEF1Q8WWN9 437 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-214ENST00000477152 ASB10Q8WXI3 467 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 LZICQ8WZA0 190 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 CFHR4Q92496 578 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 SLC7A6OSQ96CW6 309 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-214ENST00000477152 ECSITQ9BQ95 431 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 NANOGQ9H9S0 305 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 MAN2C1Q9NTJ4 1040 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 MYEF2Q9P2K5 600 aaKnown RBP6.16□□□□□ -1.42
BRCA1-214ENST00000477152 AP3M1Q9Y2T2 418 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
BRCA1-214ENST00000477152 C5orf49A4QMS7 147 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 TIMM8AO60220 97 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-214ENST00000477152 TRMUO75648 421 aaKnown RBP6.15□□□□□ -1.42
BRCA1-214ENST00000477152 NCR1O76036 304 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 PRSS23O95084 383 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 CST2P09228 141 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 COX5BP10606 129 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 MALP21145 153 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF133P52736 654 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-214ENST00000477152 UGT2B15P54855 530 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 RPL18Q07020 188 aaKnown RBP6.15□□□□□ -1.42
BRCA1-214ENST00000477152 ST3GAL3Q11203 375 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 MAPRE2Q15555 327 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 FAM27BQ5VT28 67 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 METTL21CQ5VZV1 264 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 WDR88Q6ZMY6 472 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 CCDC80Q76M96 950 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 MSRB3Q8IXL7 192 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 SYT14Q8NB59 555 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 TMEM239Q8WW34 195 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 LIPHQ8WWY8 451 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF347Q96SE7 839 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF426Q9BUY5 554 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 MRPL13Q9BYD1 178 aaKnown RBP6.15□□□□□ -1.42
BRCA1-214ENST00000477152 TXNIPQ9H3M7 391 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 UBAP1Q9NZ09 502 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 OR5V1Q9UGF6 321 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 NPTNQ9Y639 398 aa6.15□□□□□ -1.42
BRCA1-214ENST00000477152 ANK3Q12955 4377 aaKnown RBP6.15□□□□□ -1.42
BRCA1-214ENST00000477152 AHCYL1O43865 530 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 TPST2O60704 377 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 TSPAN15O95858 294 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 OPN1SWP03999 348 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 CD55P08174 381 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 VSIG10L2P0DP72 767 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 CCL2P13500 99 aa6.15□□□□□ -1.43
BRCA1-214ENST00000477152 SLURP1P55000 103 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms