RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SARAFQ96BY9 339 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 TRIB1Q96RU8 372 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 KCNS3Q9BQ31 491 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 PARPBPQ9NWS1 579 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 FAM206AQ9NX38 181 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 PLEKHB1Q9UF11 243 aaPredicted RBP12.7□□□□□ -0.38
COL4A6-206ENST00000477085 R4GMQ9 66 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 NCOR2Q9Y618 2525 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 UCHL1P09936 223 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 PATE4P0C8F1 98 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 SYT9Q86SS6 491 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 MCEMP1Q8IX19 187 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 TEX19Q8NA77 164 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 GPR137Q96N19 417 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 FOXB1Q99853 325 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 KCNN2Q9H2S1 579 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 PRSS50Q9UI38 385 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 CACNA1CQ13936 2221 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 TRBV5-5A0A0J9YX44 114 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 TMEM269A0A1B0GVZ9 245 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 ACOD1A6NK06 481 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF879B4DU55 563 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 RPL36A-HNRNPH2H7BZ11 118 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 NPR2P20594 1047 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 GUCA1AP43080 201 aaPredicted RBP12.69□□□□□ -0.38
COL4A6-206ENST00000477085 RORCP51449 518 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 MMP16P51512 607 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 UCNP55089 124 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 HNRNPA0Q13151 305 aaKnown RBP12.69□□□□□ -0.38
COL4A6-206ENST00000477085 GUSBP1Q15486 140 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 INAQ16352 499 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 SKA3Q8IX90 412 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 SLC22A24Q8N4F4 322 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 C9orf106Q8NAJ2 232 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 C12orf49Q9H741 205 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 NOX4Q9NPH5 578 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 B3GAT2Q9NPZ5 323 aa12.69□□□□□ -0.38
COL4A6-206ENST00000477085 DDX28Q9NUL7 540 aaKnown RBP12.69□□□□□ -0.38
COL4A6-206ENST00000477085 PTPRQQ9UMZ3 2332 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 PIEZO2Q9H5I5 2752 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF878C9JN71 531 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 CTDSP2O14595 271 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 CASKO14936 926 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 SS18L1O75177 396 aaPredicted RBP12.68□□□□□ -0.38
COL4A6-206ENST00000477085 GATBO75879 557 aaKnown RBP12.68□□□□□ -0.38
COL4A6-206ENST00000477085 SERPINA3P01011 423 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 DCTDP32321 178 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 MTNR1BP49286 362 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ARF1P84077 181 aaKnown RBP12.68□□□□□ -0.38
COL4A6-206ENST00000477085 MOGQ16653 247 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ACSF3Q4G176 576 aaPredicted RBP12.68□□□□□ -0.38
COL4A6-206ENST00000477085 CEP78Q5JTW2 689 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 C9orf135Q5VTT2 229 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 KLHL24Q6TFL4 600 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 SEM1Q6ZVN7 128 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 RHOUQ7L0Q8 258 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 NAA40Q86UY6 237 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF676Q8N7Q3 588 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 DERL3Q96Q80 235 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 MMP27Q9H306 513 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 BRD7Q9NPI1 651 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF224Q9NZL3 707 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF319Q9P2F9 582 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 OR52A1Q9UKL2 312 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 GTF2A1LQ9UNN4 478 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 SLC5A6Q9Y289 635 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 A3GALT2U3KPV4 340 aa12.68□□□□□ -0.38
COL4A6-206ENST00000477085 A0A0G2JK05 382 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 C5orf63A6NC05 138 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 OR14I1A6ND48 311 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 E9PLN8 166 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 KRT33AO76009 404 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 CRYABP02511 175 aaKnown RBP12.67□□□□□ -0.38
COL4A6-206ENST00000477085 CST2P09228 141 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 OR10A3P58181 314 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF585AQ6P3V2 769 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 GCNT2Q8N0V5 402 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 GJC3Q8NFK1 279 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 SLC7A6Q92536 515 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 GMPPAQ96IJ6 420 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-206ENST00000477085 C6orf62Q9GZU0 229 aaPredicted RBP12.67□□□□□ -0.38
COL4A6-206ENST00000477085 GP6Q9HCN6 339 aa12.67□□□□□ -0.38
COL4A6-206ENST00000477085 DSPP15924 2871 aaKnown RBP12.67□□□□□ -0.38
COL4A6-206ENST00000477085 AHRRA9YTQ3 701 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 LOC110117498-PIK3R3F6TDL0 507 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 FCGR2AP12318 317 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 CTSSP25774 331 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 SOX6P35712 828 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 SOX2P48431 317 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 PRKXP51817 358 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 FAPQ12884 760 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 Q499Y3 187 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 RTL6Q6ICC9 239 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 PRSS45Q7RTY3 260 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms