RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SATL1Q86VE3 508 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 P2RY8Q86VZ1 359 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CLVS1Q8IUQ0 354 aaPredicted RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CROCCP3Q8IVE0 287 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 TUSC5Q8IXB3 177 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 C1orf174Q8IYL3 243 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 SLC26A10Q8NG04 563 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 OR6K3Q8NGY3 331 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 FNDC9Q8TBE3 224 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 FAM57AQ8TBR7 257 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 GATAD2BQ8WXI9 593 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 BOD1Q96IK1 185 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF385AQ96PM9 386 aaKnown RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 DOK1Q99704 481 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 SH3GL3Q99963 347 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 EMC6Q9BV81 110 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 RBM24Q9BX46 236 aaKnown RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 HCAR1Q9BXC0 346 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 RERGLQ9H628 205 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 PLSCR4Q9NRQ2 329 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 SPRR3Q9UBC9 169 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CYB5R1Q9UHQ9 305 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 TINAGQ9UJW2 476 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF835Q9Y2P0 537 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 MEMO1Q9Y316 297 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CEPT1Q9Y6K0 416 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 NIPBLQ6KC79 2804 aaeCLIP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ANKHD1Q8IWZ3 2542 aaKnown RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ABCA4P78363 2273 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 CPAMD8Q8IZJ3 1885 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 IGHV3-15A0A0B4J1V0 119 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 TRDV1A0A1B0GX56 115 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 FAM221AA4D161 298 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MBD3L5A6NJ08 208 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF814B7Z6K7 855 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 AIREO43918 545 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 GATBO75879 557 aaKnown RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 INMTO95050 263 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 COX5BP10606 129 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 CLUP10909 449 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 CD99P14209 185 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ABOP16442 354 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 TUBG1P23258 451 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MAPK3P27361 379 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MPGP29372 298 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 FGF9P31371 208 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 GABRA5P31644 462 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 OPRM1P35372 400 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 UGT2B10P36537 528 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MAP2K4P45985 399 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 OR3A2P47893 321 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 SERPINB10P48595 397 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 RUNX1T1Q06455 604 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 PIGFQ07326 219 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 AQP6Q13520 282 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MELKQ14680 651 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 P2RY6Q15077 328 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 SGCAQ16586 387 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 SLC36A2Q495M3 483 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 YIF1BQ5BJH7 314 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM244Q5VVB8 128 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 GPR107Q5VW38 600 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 UNQ6126/PRO20091Q6UXV3 157 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MEX3BQ6ZN04 569 aaKnown RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF704Q6ZNC4 412 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 BEND4Q6ZU67 534 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 USP43Q70EL4 1123 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 DPY19L4Q7Z388 723 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 PHC2Q8IXK0 858 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 YIPF7Q8N8F6 280 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ACBD4Q8NC06 268 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF485Q8NCK3 441 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 OR51L1Q8NGJ5 315 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 OR6N2Q8NGY6 317 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MBD3L2Q8NHZ7 208 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 SPRYD4Q8WW59 207 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 C11orf40Q8WZ69 217 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 NSMAFQ92636 917 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 SPTSSAQ969W0 71 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 YIPF6Q96EC8 236 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF845Q96IR2 970 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 TSSK2Q96PF2 358 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 OR8B4Q96RC9 309 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 TRIB1Q96RU8 372 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF649Q9BS31 505 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 FUNDC2Q9BWH2 189 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 COMMD4Q9H0A8 199 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 PIGMQ9H3S5 423 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 MOB1AQ9H8S9 216 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 GPR35Q9HC97 309 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 OBP2BQ9NPH6 170 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 POLE4Q9NR33 117 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 TUBG2Q9NRH3 451 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 CLCF1Q9UBD9 225 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF629Q9UEG4 869 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-207ENST00000475558 CLEC2DQ9UHP7 191 aa6.18□□□□□ -1.42
SHQ1-207ENST00000475558 ATPIF1Q9UII2 106 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms