RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ARHGDIAP52565 204 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 RSPO1Q2MKA7 263 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-209ENST00000474432 HFEQ30201 348 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 RFX4Q33E94 735 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 MTX3Q5HYI7 312 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 OR51F2Q8NH61 342 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 NDEL1Q9GZM8 345 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 NSRP1Q9H0G5 558 aaKnown RBP15.72■□□□□ 0.11
COL7A1-209ENST00000474432 RERGLQ9H628 205 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 CYSLTR2Q9NS75 346 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 CGGBP1Q9UFW8 167 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-209ENST00000474432 TAGLN3Q9UI15 199 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 MAGEL2Q9UJ55 1249 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 PURGQ9UJV8 347 aaKnown RBP15.72■□□□□ 0.11
COL7A1-209ENST00000474432 LHFPL6Q9Y693 200 aa15.72■□□□□ 0.11
COL7A1-209ENST00000474432 ARPC3O15145 178 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 PLPP2O43688 288 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 DBHP09172 617 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 ITGA2P17301 1181 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 SRP14P37108 136 aaKnown RBP15.71■□□□□ 0.11
COL7A1-209ENST00000474432 GSSP48637 474 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 MEP1BQ16820 701 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 SAMD4BQ5PRF9 694 aaKnown RBP15.71■□□□□ 0.11
COL7A1-209ENST00000474432 OR6V1Q8N148 313 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 RFLNBQ8N5W9 214 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 NPEPL1Q8NDH3 523 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 OR1F12Q8NHA8 337 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 CCL17Q92583 94 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 HAVCR1Q96D42 359 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 CMBLQ96DG6 245 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 ERMAPQ96PL5 475 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-209ENST00000474432 OR52D1Q9H346 318 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 IL1RAPQ9NPH3 570 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 PLEK2Q9NYT0 353 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 ZDHHC8Q9ULC8 765 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 B9D1Q9UPM9 204 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 ARL2BPQ9Y2Y0 163 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 GRIP1Q9Y3R0 1128 aa15.71■□□□□ 0.11
COL7A1-209ENST00000474432 TRAV20A0A0B4J274 112 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 PCMT1P22061 227 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 TUBG1P23258 451 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 FPR3P25089 353 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 RPS6KA3P51812 740 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 GNGT1P63211 74 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 SPIBQ01892 262 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 KRT72Q14CN4 511 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 ACSM5Q6NUN0 579 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 C1orf94Q6P1W5 598 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 ARL9Q6T311 187 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 FANK1Q8TC84 345 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 NSMCE2Q96MF7 247 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 DIRC2Q96SL1 478 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 NMNAT3Q96T66 252 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 TUBG2Q9NRH3 451 aa15.7■□□□□ 0.1
COL7A1-209ENST00000474432 ANK2Q01484 3957 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 TIMM8AO60220 97 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-209ENST00000474432 GMNNO75496 209 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 HIST1H1CP16403 213 aaKnown RBP15.69■□□□□ 0.1
COL7A1-209ENST00000474432 RRM2P31350 389 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 SMIM11AP58511 58 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 TNFAIP6P98066 277 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-209ENST00000474432 KRTAP27-1Q3LI81 207 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 DEFB107AQ8IZN7 70 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 SLC26A10Q8NG04 563 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 RAB1CQ92928 201 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 SAMD8Q96LT4 415 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 TMPRSS13Q9BYE2 586 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 EGLN1Q9GZT9 426 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 METTL17Q9H7H0 456 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-209ENST00000474432 SRA1Q9HD15 236 aaKnown RBP15.69■□□□□ 0.1
COL7A1-209ENST00000474432 KRCC1Q9NPI7 259 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-209ENST00000474432 ATPIF1Q9UII2 106 aa15.69■□□□□ 0.1
COL7A1-209ENST00000474432 OR6C68A6NDL8 312 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 TCF21O43680 179 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 IGHV2-70P01814 119 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 FABP3P05413 133 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 GSTM3P21266 225 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 SLC6A6P31641 620 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 HMGA2P52926 109 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 COX10Q12887 443 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 ZMAT1Q5H9K5 638 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 FAHD2BQ6P2I3 314 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-209ENST00000474432 PGBD2Q6P3X8 592 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 LEG1Q6P5S2 330 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 CORO6Q6QEF8 472 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 ZBTB46Q86UZ6 589 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 OR4K13Q8NH42 304 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 PTP4A1Q93096 173 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 RAB39BQ96DA2 213 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 FAHD2AQ96GK7 314 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 DDOQ99489 341 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 METRNQ9UJH8 293 aa15.68■□□□□ 0.1
COL7A1-209ENST00000474432 OR10H3O60404 316 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 VENTXO95231 258 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 PNPP00491 289 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 ANPEPP15144 967 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 RAC2P15153 192 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 ATP6V1B2P21281 511 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 CRABP1P29762 137 aa15.67■□□□□ 0.1
COL7A1-209ENST00000474432 TSPAN31Q12999 210 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms