RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SCRN3Q0VDG4 424 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 KCNMB1Q16558 191 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 ZSCAN26Q16670 478 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 TBC1D28Q2M2D7 210 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 TMEM236Q5W0B7 351 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 CXXC5Q7LFL8 322 aaKnown RBP15.53■□□□□ 0.08
SNX4-204ENST00000473417 SYT9Q86SS6 491 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 ALDH16A1Q8IZ83 802 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 PROKR2Q8NFJ6 384 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 OR51L1Q8NGJ5 315 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 OR1J2Q8NGS2 313 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 OR2T4Q8NH00 348 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 SPATA3Q8NHX4 192 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 ZNRF4Q8WWF5 429 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 VRK1Q99986 396 aaPredicted RBP15.53■□□□□ 0.08
SNX4-204ENST00000473417 RBM4Q9BWF3 364 aaKnown RBP15.53■□□□□ 0.08
SNX4-204ENST00000473417 GABARAPL1Q9H0R8 117 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 C1orf198Q9H425 327 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 CMC2Q9NRP2 79 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 KRT84Q9NSB2 600 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 ASH2LQ9UBL3 628 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 SPEF1Q9Y4P9 236 aa15.53■□□□□ 0.08
SNX4-204ENST00000473417 TFP02787 698 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 GYPBP06028 91 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 FAM157BP0CG42 384 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 ZNF3P17036 446 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 USF1P22415 310 aaPredicted RBP15.52■□□□□ 0.08
SNX4-204ENST00000473417 CRISP1P54107 249 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 CDK5Q00535 292 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 TEKQ02763 1124 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 AQP6Q13520 282 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 SLC26A10Q8NG04 563 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 OTULINQ96BN8 352 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 WACQ9BTA9 647 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 OR51B6Q9H340 312 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 S100A14Q9HCY8 104 aa15.52■□□□□ 0.08
SNX4-204ENST00000473417 MYOZ1Q9NP98 299 aaPredicted RBP15.52■□□□□ 0.08
SNX4-204ENST00000473417 FBXO9Q9UK97 447 aaPredicted RBP15.52■□□□□ 0.08
SNX4-204ENST00000473417 FBN3Q75N90 2809 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 LOC100509620A0A075B734 347 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 TVP23AA6NH52 213 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 FAM183AA6NL82 134 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 ANKRD65E5RJM6 399 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 HMGN1P05114 100 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 CLUP10909 449 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 GDI2P50395 445 aaKnown RBP15.51■□□□□ 0.07
SNX4-204ENST00000473417 SLC25A1P53007 311 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 KDM4DQ6B0I6 523 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 PARP8Q8N3A8 854 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 POM121L2Q96KW2 1035 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 PIMREGQ9BSJ6 248 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 HCAR1Q9BXC0 346 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 NMNAT2Q9BZQ4 307 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 MED20Q9H944 212 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 PLEK2Q9NYT0 353 aa15.51■□□□□ 0.07
SNX4-204ENST00000473417 LOC390937A0A1W2PQ73 354 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 TMEM129A0AVI4 362 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 C5orf49A4QMS7 147 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 VSTM5A8MXK1 200 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 RER1O15258 196 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 SURF4O15260 269 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 SGCEO43556 437 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 DOK2O60496 412 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 IGHV4-31P0DP07 118 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 ZNF16P17020 682 aaPredicted RBP15.5■□□□□ 0.07
SNX4-204ENST00000473417 SPI1P17947 270 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 NR4A2P43354 598 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 PTGES3Q15185 160 aaKnown RBP15.5■□□□□ 0.07
SNX4-204ENST00000473417 CHRFAM7AQ494W8 412 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 CORO6Q6QEF8 472 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 LYPD4Q6UWN0 246 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 LINC00346Q8IVM7 164 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 DOK1Q99704 481 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 CDADC1Q9BWV3 514 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 TEX12Q9BXU0 123 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 SLC25A19Q9HC21 320 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 MRPL22Q9NWU5 206 aaKnown RBP15.5■□□□□ 0.07
SNX4-204ENST00000473417 TMEM160Q9NX00 188 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 LHFPL6Q9Y693 200 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 SVEP1Q4LDE5 3571 aa15.5■□□□□ 0.07
SNX4-204ENST00000473417 STAB1Q9NY15 2570 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 SNAP29O95721 258 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 IFNA2P01563 188 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 ZNF823P16415 610 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 IGFBP5P24593 272 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 GLRXP35754 106 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 HTR5AP47898 357 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 ESRRGP62508 458 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 GGTLC2Q14390 218 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 MSMPQ1L6U9 139 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 CCDC92Q53HC0 331 aaPredicted RBP15.49■□□□□ 0.07
SNX4-204ENST00000473417 PLBD1Q6P4A8 553 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 VASH1Q7L8A9 365 aaPredicted RBP15.49■□□□□ 0.07
SNX4-204ENST00000473417 ZNF511Q8NB15 262 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 OR6K6Q8NGW6 343 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 PTP4A1Q93096 173 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 PLEKHA8Q96JA3 519 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 CIB1Q99828 191 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 OSBPL10Q9BXB5 764 aa15.49■□□□□ 0.07
SNX4-204ENST00000473417 RAB1BQ9H0U4 201 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms