RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 OCEL1Q9H607 264 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 ELOVL3Q9HB03 270 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 TBCCD1Q9NVR7 557 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 PURGQ9UJV8 347 aaKnown RBP14.1□□□□□ -0.15
USP40-212ENST00000473191 ARPC2O15144 300 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 AHCYL1O43865 530 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 GADD45GO95257 159 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 TXNDC12O95881 172 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 ADH4P08319 380 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 CENPAP49450 140 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 ARHGDIAP52565 204 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 TNFAIP6P98066 277 aaPredicted RBP14.09□□□□□ -0.15
USP40-212ENST00000473191 CDK5R2Q13319 367 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 AQP6Q13520 282 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 RSPO1Q2MKA7 263 aaPredicted RBP14.09□□□□□ -0.15
USP40-212ENST00000473191 GPR139Q6DWJ6 353 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 ACSM5Q6NUN0 579 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 SMARCD3Q6STE5 483 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 DPY19L2P2Q6ZN68 376 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 OR5AS1Q8N127 324 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 OR6V1Q8N148 313 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.09□□□□□ -0.15
USP40-212ENST00000473191 OR2Z1Q8NG97 314 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 OR1F12Q8NHA8 337 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 ERMAPQ96PL5 475 aaPredicted RBP14.09□□□□□ -0.15
USP40-212ENST00000473191 CDRT15Q96T59 188 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 NMNAT3Q96T66 252 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 OR52D1Q9H346 318 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 SRA1Q9HD15 236 aaKnown RBP14.09□□□□□ -0.15
USP40-212ENST00000473191 UBAP1Q9NZ09 502 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 LHFPL6Q9Y693 200 aa14.09□□□□□ -0.15
USP40-212ENST00000473191 STAB1Q9NY15 2570 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 IGLV1-36A0A0B4J1U3 117 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 TRAV20A0A0B4J274 112 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 ISPDA4D126 451 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 PNPP00491 289 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 CD55P08174 381 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 HSD17B1P14061 328 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 HIST1H1CP16403 213 aaKnown RBP14.08□□□□□ -0.16
USP40-212ENST00000473191 ANOS1P23352 680 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 ZFP36P26651 326 aaKnown RBP14.08□□□□□ -0.16
USP40-212ENST00000473191 RRM2P31350 389 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 SEC61A1P61619 476 aaKnown RBP14.08□□□□□ -0.16
USP40-212ENST00000473191 LSM6P62312 80 aaKnown RBP14.08□□□□□ -0.16
USP40-212ENST00000473191 LCN2P80188 198 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 RFX4Q33E94 735 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 LEG1Q6P5S2 330 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 UNQ6126/PRO20091Q6UXV3 157 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 CPLX4Q7Z7G2 160 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 PGAM4Q8N0Y7 254 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 SEMA6DQ8NFY4 1073 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 OR4K13Q8NH42 304 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 FANK1Q8TC84 345 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 ITLN1Q8WWA0 313 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 SAMD8Q96LT4 415 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 GAL3ST1Q99999 423 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 WDR76Q9H967 626 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 PTTG3PQ9NZH4 202 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 B9D1Q9UPM9 204 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 DYSFO75923 2080 aa14.08□□□□□ -0.16
USP40-212ENST00000473191 IGHV3-64DA0A0J9YX35 117 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 H0YL77 283 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 H3BSA7 217 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 ATP8B1O43520 1251 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 KITLGP21583 273 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 RPS6KA3P51812 740 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 GNGT1P63211 74 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 HIST1H3AP68431 136 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 KRT72Q14CN4 511 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 KCNMB1Q16558 191 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 HIST2H3PS2Q5TEC6 136 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 LIPNQ5VXI9 398 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 CFAP77Q6ZQR2 320 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 HIST2H3AQ71DI3 136 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 ADCK1Q86TW2 530 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 NAA40Q86UY6 237 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 LINC00346Q8IVM7 164 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 SDR9C7Q8NEX9 313 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 ZNRF4Q8WWF5 429 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 RAB1CQ92928 201 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 HAVCR1Q96D42 359 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 SIGLEC11Q96RL6 698 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 EGLN1Q9GZT9 426 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 CYSLTR2Q9NS75 346 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 ZDHHC8Q9ULC8 765 aa14.07□□□□□ -0.16
USP40-212ENST00000473191 OR6C68A6NDL8 312 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 OR10H3O60404 316 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 IGHV2-70P01814 119 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 SBK2P0C263 348 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 PSKH1P11801 424 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 SELEP16581 610 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 GSTM3P21266 225 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 PCMT1P22061 227 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 LIPAP38571 399 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 PPP1R8Q12972 351 aaKnown RBP14.06□□□□□ -0.16
USP40-212ENST00000473191 SLC35F1Q5T1Q4 408 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 OR2T2Q6IF00 324 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 PGBD2Q6P3X8 592 aa14.06□□□□□ -0.16
USP40-212ENST00000473191 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms