RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PPP1R1CQ8WVI7 109 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 WNT2BQ93097 391 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 ZBTB8AQ96BR9 441 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 MS4A8Q9BY19 250 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 HDAC8Q9BY41 377 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 CHST6Q9GZX3 395 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 SLCO5A1Q9H2Y9 848 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 SUV39H2Q9H5I1 410 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 PELI2Q9HAT8 420 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 LPAR3Q9UBY5 353 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 PISDQ9UG56 409 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 GPR55Q9Y2T6 319 aaPredicted RBP9.1□□□□□ -0.95
APTX-216ENST00000472896 TMEM184BQ9Y519 407 aaPredicted RBP9.1□□□□□ -0.95
APTX-216ENST00000472896 NBASA2RRP1 2371 aa9.1□□□□□ -0.95
APTX-216ENST00000472896 TRBV6-7A0A0A0MS04 114 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 A0A1B0GV90 55 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 A0A1W2PPE3 182 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 IGLON5A6NGN9 336 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 TVP23AA6NH52 213 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 LMO7DNF2Z398 122 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 EIF1AYO14602 144 aaKnown RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 SRPX2O60687 465 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 ZNF432O94892 652 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 THY1P04216 161 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 NQO2P16083 231 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 S100A2P29034 98 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 PRSS3P35030 304 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 ADH7P40394 386 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 RABIFP47224 123 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 EIF1AXP47813 144 aaKnown RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 PRLHRP49683 370 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 FXYD6P3P58550 94 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 EIPR1Q53HC9 387 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 PRRT3Q5FWE3 981 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 PRAMEF17Q5VTA0 474 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 ARHGAP11AQ6P4F7 1023 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 SSX6Q7RTT6 188 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 SZRD1Q7Z422 152 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 RANBP3LQ86VV4 465 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 VRK2Q86Y07 508 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 SLC35F2Q8IXU6 374 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 GABRG1Q8N1C3 465 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 TRAM1L1Q8N609 369 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 CLEC1AQ8NC01 280 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 OR1J2Q8NGS2 313 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 NAT6Q93015 286 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 LURAP1Q96LR2 239 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 CNN2Q99439 309 aaKnown RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 NAA11Q9BSU3 229 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 TWSG1Q9GZX9 223 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 FOXJ2Q9P0K8 574 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 CACFD1Q9UGQ2 172 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 ZNF230Q9UIE0 474 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 SLC7A7Q9UM01 511 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 SH2B3Q9UQQ2 575 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 HS3ST2Q9Y278 367 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 ASF1AQ9Y294 204 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 NOP16Q9Y3C1 178 aaKnown RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 TMEM72A0PK05 275 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 BLACEA4D250 179 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 ZNF208O43345 1280 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 TSPAN6O43657 245 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 LEFTY1O75610 366 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 PPP1R3DO95685 299 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 LIPCP11150 499 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 MPIP34949 423 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 PPICP45877 212 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 CDX1P47902 265 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 NCBP2P52298 156 aaKnown RBP eCLIP9.09□□□□□ -0.95
APTX-216ENST00000472896 ATP1B3P54709 279 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 DVL1P1P54792 670 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 RAB1AP62820 205 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 RPS21P63220 83 aaKnown RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 CYCSP99999 105 aaKnown RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 CRMP1Q14194 572 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 BEX5Q5H9J7 111 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 FAM180BQ6P0A1 224 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 FAHD2BQ6P2I3 314 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 UNQ6126/PRO20091Q6UXV3 157 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 STAC2Q6ZMT1 411 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 FAM129CQ86XR2 697 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 DTX1Q86Y01 620 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 OR2L13Q8N349 312 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 ARRDC1Q8N5I2 433 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 COMMD1Q8N668 190 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 OR10H5Q8NGA6 315 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 OR4K17Q8NGC6 315 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 GPX8Q8TED1 209 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 CCDC74AQ96AQ1 378 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 FOXRED1Q96CU9 486 aaPredicted RBP9.09□□□□□ -0.95
APTX-216ENST00000472896 FAHD2AQ96GK7 314 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 S100A13Q99584 98 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 SSX3Q99909 188 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 MICU1Q9BPX6 476 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 LRRC61Q9BV99 259 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 LGR4Q9BXB1 951 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
APTX-216ENST00000472896 RPS10P5Q9NQ39 176 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms