RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 RGS6P49758 472 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 FXYD6P3P58550 94 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 TRIP10Q15642 601 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 SLC35F1Q5T1Q4 408 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 LCN8Q6JVE9 175 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 PGBD2Q6P3X8 592 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 RFPL4BQ6ZWI9 263 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 USP51Q70EK9 711 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 PEG10Q86TG7 708 aaKnown RBP16.6■□□□□ 0.25
COMMD1-208ENST00000472729 ELMOD3Q96FG2 381 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 TSSK2Q96PF2 358 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 B9D1Q9UPM9 204 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 SAMHD1Q9Y3Z3 626 aaKnown RBP16.6■□□□□ 0.25
COMMD1-208ENST00000472729 LYVE1Q9Y5Y7 322 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 KIAA1324LA8MWY0 1029 aaPredicted RBP16.59■□□□□ 0.25
COMMD1-208ENST00000472729 CLDN25C9JDP6 229 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 GNGT2O14610 69 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 SRD5A1P18405 259 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 CRYBB2P43320 205 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 HMGA2P52926 109 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 CDH15P55291 814 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 SLC3A1Q07837 685 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 ZNF620Q6ZNG0 422 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 OR52E2Q8NGJ4 325 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 BCAS4Q8TDM0 211 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 CCL17Q92583 94 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 RAB1CQ92928 201 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 ASB9Q96DX5 294 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 DCLRE1CQ96SD1 692 aaKnown RBP16.59■□□□□ 0.25
COMMD1-208ENST00000472729 THTPAQ9BU02 230 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 C1orf21Q9H246 121 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 TBC1D23Q9NUY8 699 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 CDH10Q9Y6N8 788 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 U3KQV3 271 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 JMJD1CQ15652 2540 aa16.59■□□□□ 0.25
COMMD1-208ENST00000472729 B4DSR2 109 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 RER1O15258 196 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 GYG2O15488 501 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 ICMTO60725 284 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 NCR1O76036 304 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 TFP02787 698 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 ANPEPP15144 967 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 ZNF823P16415 610 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 KCNMB1Q16558 191 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 FAM120AOSQ5T036 256 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 OTPQ5XKR4 325 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 OR2T5Q6IEZ7 315 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 OR6V1Q8N148 313 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 AQP11Q8NBQ7 271 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 SDR9C7Q8NEX9 313 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 PROKR2Q8NFJ6 384 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 OR9Q2Q8NGE9 314 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 OR2T29Q8NH02 315 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 YIPF5Q969M3 257 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 RACGAP1Q9H0H5 632 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 HDHD2Q9H0R4 259 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 EGLN3Q9H6Z9 239 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 ATPIF1Q9UII2 106 aa16.58■□□□□ 0.24
COMMD1-208ENST00000472729 ZANQ9Y493 2812 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 ABCA1O95477 2261 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 IGHV1-46P01743 117 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 RAP2AP10114 183 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 MAGEA2P43356 314 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 MMP15P51511 669 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 MVKQ03426 396 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.57■□□□□ 0.24
COMMD1-208ENST00000472729 TRPM8Q7Z2W7 1104 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 GLCCI1Q86VQ1 547 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 OR2T4Q8NH00 348 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 PTP4A1Q93096 173 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 CMBLQ96DG6 245 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 PITX2Q99697 317 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 ARFGEF3Q5TH69 2177 aa16.57■□□□□ 0.24
COMMD1-208ENST00000472729 J3QW42 95 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 SURF4O15260 269 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 GPANK1O95872 356 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 GASTP01350 101 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 HOXB6P17509 224 aaKnown RBP16.56■□□□□ 0.24
COMMD1-208ENST00000472729 IGFBP5P24593 272 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 IL2RGP31785 369 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 SRP14P37108 136 aaKnown RBP16.56■□□□□ 0.24
COMMD1-208ENST00000472729 TNFAIP6P98066 277 aaPredicted RBP16.56■□□□□ 0.24
COMMD1-208ENST00000472729 MS4A2Q01362 244 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 ECH1Q13011 328 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 PSG7Q13046 419 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 MEP1BQ16820 701 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 MICAQ29983 383 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 DNAL1Q4LDG9 190 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 CCDC92Q53HC0 331 aaPredicted RBP16.56■□□□□ 0.24
COMMD1-208ENST00000472729 CORO6Q6QEF8 472 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 RASSF6Q6ZTQ3 369 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 SLC7A6Q92536 515 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 GTF3AQ92664 365 aaKnown RBP16.56■□□□□ 0.24
COMMD1-208ENST00000472729 COQ7Q99807 217 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 MSL2Q9HCI7 577 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 TAS2R1Q9NYW7 299 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 TREM2Q9NZC2 230 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 TMEFF2Q9UIK5 374 aaPredicted RBP16.56■□□□□ 0.24
COMMD1-208ENST00000472729 STARD10Q9Y365 291 aa16.56■□□□□ 0.24
COMMD1-208ENST00000472729 IGLV1-36A0A0B4J1U3 117 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms