RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 CLDN23Q96B33 292 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 GRAMD2BQ96HH9 432 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 OR5B12Q96R08 314 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 SIGMAR1Q99720 223 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 BTBD10Q9BSF8 475 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 SUCNR1Q9BXA5 334 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 SNHG12Q9BXW3 62 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 MAP1LC3AQ9H492 121 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 LRTM1Q9HBL6 345 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 C19orf73Q9NVV2 129 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 TECRQ9NZ01 308 aaKnown RBP2.83□□□□□ -1.96
TTC3-214ENST00000472398 DUX4Q9UBX2 424 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 LSM7Q9UK45 103 aaKnown RBP2.83□□□□□ -1.96
TTC3-214ENST00000472398 PILRAQ9UKJ1 303 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 BAIAP2Q9UQB8 552 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 NSG2Q9Y328 171 aa2.83□□□□□ -1.96
TTC3-214ENST00000472398 ZNF608Q9ULD9 1512 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 MEIKINA0A087WXM9 373 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 PRSS51A0A1B0GVH4 220 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 C20orf202A1L168 122 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 OVOL3O00110 214 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 DNASE2O00115 360 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 SIRPB1O00241 398 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ZNF195O14628 629 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 MFSD11O43934 449 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SLC16A7O60669 478 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ATG12O94817 140 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 EML2O95834 649 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 THY1P04216 161 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CYBAP13498 195 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 HIST1H1BP16401 226 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 SRD5A1P18405 259 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 HRH2P25021 359 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SSTR4P31391 388 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CDKN2BP42772 138 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 QARSP47897 775 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 RIPPLY3P57055 190 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 RPS6P62753 249 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 PAFAH1B2P68402 229 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SLC25A52Q3SY17 297 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 VWA2Q5GFL6 755 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 FAM78BQ5VT40 261 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CST9Q5W186 159 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 FAM71E1Q6IPT2 247 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 GPBP1Q86WP2 473 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 LRRC28Q86X40 367 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 SLC30A8Q8IWU4 369 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CPNE9Q8IYJ1 553 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CFAP52Q8N1V2 620 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 C12orf45Q8N5I9 185 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 BEST4Q8NFU0 473 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 GPR32P1Q8NGA4 272 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 OR6T1Q8NGN1 323 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 OR4C13Q8NGP0 309 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 OR1J2Q8NGS2 313 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 TMEM37Q8WXS4 190 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 MYLIPQ8WY64 445 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 UCN3Q969E3 161 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 PTX4Q96A99 478 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ZC3HAV1LQ96H79 300 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 PEX11GQ96HA9 241 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ADTRPQ96IZ2 230 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CAPZA3Q96KX2 299 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SGK494Q96LW2 274 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 LPAR4Q99677 370 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 RSPO3Q9BXY4 272 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 MROQ9BYG7 248 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ACTR3CQ9C0K3 210 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 RBM38Q9H0Z9 239 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 CXXC4Q9H2H0 198 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ZNF703Q9H7S9 590 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 Q9H8V8 135 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ZNF224Q9NZL3 707 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 THYN1Q9P016 225 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 FOXJ2Q9P0K8 574 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 STEAP1Q9UHE8 339 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ZNF230Q9UIE0 474 aaPredicted RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 PURGQ9UJV8 347 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 SNX12Q9UMY4 172 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 ETV7Q9Y603 341 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 RIMS1Q86UR5 1692 aaKnown RBP2.82□□□□□ -1.96
TTC3-214ENST00000472398 BCL9O00512 1426 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 MST1RQ04912 1400 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 FGD6Q6ZV73 1430 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SNAPC4Q5SXM2 1469 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 RB1CC1Q8TDY2 1594 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 A0A087WX48 190 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 A0A0G2JN53 185 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 TRBV4-1A0A0J9YWV2 114 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SMIM28A0A1B0GU29 152 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 A0A1W2PRE2 83 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SLC22A23A1A5C7 686 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 FAM231BA6NCW3 169 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 SERINC4A6NH21 518 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 LILRA5A6NI73 299 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 FAM159BA6NKW6 160 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 CLDN24A6NM45 220 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 A8MWP6 167 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 J3KR12 359 aa2.82□□□□□ -1.96
TTC3-214ENST00000472398 J3QR06 171 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms