RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RAF1P04049 648 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 STARP49675 285 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 Q499Y3 187 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 C10orf128Q5T292 105 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 LRFN4Q6PJG9 635 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 UBQLNLQ8IYU4 475 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 ZNF676Q8N7Q3 588 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 OR13C5Q8NGS8 318 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 ST7LQ8TDW4 575 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 RNF133Q8WVZ7 376 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 C4orf45Q96LM5 186 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 ATF6BQ99941 703 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 C1orf198Q9H425 327 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 SEC61A2Q9H9S3 476 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 ABCB9Q9NP78 766 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 ACKR4Q9NPB9 350 aa15.45■□□□□ 0.06
HSPG2-208ENST00000471322 H0YC42 278 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 DVL2O14641 736 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 PDCD5O14737 125 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 RAB3BP20337 219 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 DCTDP32321 178 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 CAV3P56539 151 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 ZNF181Q2M3W8 571 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 RGS21Q2M5E4 152 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 KRTCAP3Q53RY4 240 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 FAM27D1Q5T7N8 215 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 BTLAQ7Z6A9 289 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 FGD2Q7Z6J4 655 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.44■□□□□ 0.06
HSPG2-208ENST00000471322 TMEM123Q8N131 208 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 FAM109AQ8N4B1 249 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 MEIOBQ8N635 442 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 ZIC4Q8N9L1 334 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 OR2AJ1Q8NGZ0 328 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 GPR148Q8TDV2 347 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 HSD17B8Q92506 261 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 ZNF385AQ96PM9 386 aaKnown RBP15.44■□□□□ 0.06
HSPG2-208ENST00000471322 OR14A2Q96R54 314 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 SLITRK2Q9H156 845 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 ZDHHC11Q9H8X9 412 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 UGT2A1Q9Y4X1 527 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 MED12Q93074 2177 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 FREM3P0C091 2139 aa15.44■□□□□ 0.06
HSPG2-208ENST00000471322 TRBV5-5A0A0J9YX44 114 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 ISPDA4D126 451 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 GPR171O14626 319 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SLC19A2O60779 497 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 H2BFMP0C1H6 154 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 LHX2P50458 406 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 LSM6P62312 80 aaKnown RBP15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SLC10A1Q14973 349 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 ABLIM2Q6H8Q1 611 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 C3P1Q6ZMU1 363 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 C20orf196Q8IYI0 205 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 DERL3Q96Q80 235 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 CCDC32Q9BV29 185 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SLC6A15Q9H2J7 730 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 LDAHQ9H6V9 325 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 TINAGQ9UJW2 476 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 POLR1DQ9Y2S0 133 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 LRP12Q9Y561 859 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 R4GMQ9 66 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 TRGV8A0A0C4DH27 118 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SMIM30A4D0T7 59 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 ANKRD61A6NGH8 418 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 NOTOA8MTQ0 251 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 CYTIPO60759 359 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 UPK1BO75841 260 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 NCR1O76036 304 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 ACTL6AO96019 429 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 OCM2P0CE71 109 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SRMP19623 302 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 CLDN15P56746 228 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SRSF1Q07955 248 aaKnown RBP eCLIP15.43■□□□□ 0.06
HSPG2-208ENST00000471322 IDNKQ5T6J7 187 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 OTPQ5XKR4 325 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 OR7E24Q6IFN5 339 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 SFXN4Q6P4A7 337 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 LAX1Q8IWV1 398 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 PRSS35Q8N3Z0 413 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 RGP1Q92546 391 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-208ENST00000471322 ZCCHC4Q9H5U6 513 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 EXO5Q9H790 373 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 NIPAL2Q9H841 368 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 NOX4Q9NPH5 578 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 POLE4Q9NR33 117 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 COMMD3Q9UBI1 195 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 FLVCR1Q9Y5Y0 555 aa15.43■□□□□ 0.06
HSPG2-208ENST00000471322 GTF3C1Q12789 2109 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 ZNF716A6NP11 495 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 SLC43A1O75387 559 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 ABOP16442 354 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 ZNF708P17019 499 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 ZNF84P51523 738 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 WDR38Q5JTN6 314 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 KLHL24Q6TFL4 600 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 METAP1DQ6UB28 335 aaPredicted RBP15.42■□□□□ 0.06
HSPG2-208ENST00000471322 FOXL2NBQ6ZUU3 175 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 SPATC1Q76KD6 591 aa15.42■□□□□ 0.06
HSPG2-208ENST00000471322 FCRLAQ7L513 359 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms