RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 KISS1RQ969F8 398 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 TAAR8Q969N4 342 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZPBPQ9BS86 351 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PBDC1Q9BVG4 233 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLC35B3Q9H1N7 401 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SIDT1Q9NXL6 827 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 PRR13Q9NZ81 148 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 AHSPQ9NZD4 102 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OR5AC2Q9NZP5 309 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 MSRAQ9UJ68 235 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 IKZF2Q9UKS7 526 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 TMED7Q9Y3B3 224 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ETV7Q9Y603 341 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 HS3ST3B1Q9Y662 390 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 COLEC10Q9Y6Z7 277 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CASP8AP2Q9UKL3 1982 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DOCK8Q8NF50 2099 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RLFQ13129 1914 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 A0A087WV48 116 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLC38A8A6NNN8 435 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ADM5C9JUS6 153 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OGG1O15527 345 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 GPRIN2O60269 458 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RCBTB2O95199 551 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 WNT11O96014 354 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 HMGN2P05204 90 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZGLP1P0C6A0 271 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 METTL15P1P0C7V9 234 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PGA4P0DJD7 388 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PGA5P0DJD9 388 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SERPINA2P20848 420 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 S1PR1P21453 382 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 MPZP25189 248 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 AK4P27144 223 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 FHITP49789 147 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 KHKP50053 298 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SULT1A2P50226 295 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 NCBP2P52298 156 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS50-210ENST00000471188 CLDN2P57739 230 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CYCSP99999 105 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 HERPUD1Q15011 391 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ELOCQ15369 112 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 XKR4Q5GH76 650 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 LCN10Q6JVE6 187 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PSRC1Q6PGN9 363 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 BTNL8Q6UX41 500 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 LBX2Q6XYB7 198 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SSX7Q7RTT5 188 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C5orf24Q7Z6I8 188 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PEG10Q86TG7 708 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLC35F2Q8IXU6 374 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 FAM185AQ8N0U4 392 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PAQR4Q8N4S7 273 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 HSD17B11Q8NBQ5 300 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CHST4Q8NCG5 386 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PLPP5Q8NEB5 264 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OR9A1PQ8NGU1 263 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OR51F2Q8NH61 342 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PFN4Q8NHR9 129 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SFXN5Q8TD22 340 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DIO2Q92813 273 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C16orf58Q96GQ5 468 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C5orf34Q96MH7 638 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OR5B2Q96R09 309 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF587Q96SQ5 575 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 CNN2Q99439 309 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 KXD1Q9BQD3 176 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 FAAP24Q9BTP7 215 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 MRI1Q9BV20 369 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 GPR87Q9BY21 358 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SLC25A31Q9H0C2 315 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 OR2AG1Q9H205 316 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 C1orf198Q9H425 327 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 DPEP2Q9H4A9 486 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PARP11Q9NR21 331 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CMC2Q9NRP2 79 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 USP36Q9P275 1121 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 CYP8B1Q9UNU6 501 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 VSIG4Q9Y279 399 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 POMT1Q9Y6A1 747 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SPAG17Q6Q759 2223 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 PLXND1Q9Y4D7 1925 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF705FA8MVS1 300 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 H0YIZ8 118 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 MSTNO14793 375 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 P2RX6O15547 441 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 SRPX2O60687 465 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 C1QL1O75973 258 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 STK17BO94768 372 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 GALTP07902 379 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CST2P09228 141 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF705DP0CH99 300 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ZNF705BP0CI00 300 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 C8orf89P0DMQ9 161 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 CKBP12277 381 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 ATP1B2P14415 290 aaPredicted RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 IL9P15248 144 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 RPS2P15880 293 aaKnown RBP3.82□□□□□ -1.8
VPS50-210ENST00000471188 ADRA2CP18825 462 aa3.82□□□□□ -1.8
VPS50-210ENST00000471188 TUBG1P23258 451 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms