RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ABHD4Q8TB40 342 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 SLC25A40Q8TBP6 338 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-215ENST00000470338 UBASH3BQ8TF42 649 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 PIMREGQ9BSJ6 248 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 OR2J1Q9GZK6 312 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 FN3KQ9H479 309 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 TBCCD1Q9NVR7 557 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 PLEK2Q9NYT0 353 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
TOP3B-215ENST00000470338 ANK3Q12955 4377 aaKnown RBP12.09□□□□□ -0.47
TOP3B-215ENST00000470338 C17orf100A8MU93 164 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 H3BSA7 217 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 CD5LO43866 347 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 SOX14O95416 240 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-215ENST00000470338 TUBG1P23258 451 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 GCH1P30793 250 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 MPV17P39210 176 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 ARHGDIAP52565 204 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 PPP1CBP62140 327 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 NKPD1Q17RQ9 610 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 SLC36A3Q495N2 470 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 ELFN2Q5R3F8 820 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 SPATA46Q5T0L3 261 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 CYB561A3Q8NBI2 242 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 SLC37A3Q8NCC5 494 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 ZNF540Q8NDQ6 660 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 OR2T33Q8NG76 320 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 RBM4Q9BWF3 364 aaKnown RBP12.09□□□□□ -0.47
TOP3B-215ENST00000470338 NMNAT2Q9BZQ4 307 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 HINT3Q9NQE9 182 aaKnown RBP12.09□□□□□ -0.47
TOP3B-215ENST00000470338 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 ARMC1Q9NVT9 282 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 MRPL22Q9NWU5 206 aaKnown RBP12.09□□□□□ -0.47
TOP3B-215ENST00000470338 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-215ENST00000470338 KLHL21Q9UJP4 597 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 MALRD1Q5VYJ5 2156 aa12.09□□□□□ -0.47
TOP3B-215ENST00000470338 NAV3Q8IVL0 2385 aa12.08□□□□□ -0.47
TOP3B-215ENST00000470338 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
TOP3B-215ENST00000470338 ABHD16AO95870 558 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 HPXP02790 462 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 GGT2P36268 569 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 MMP15P51511 669 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 RIN1Q13671 783 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 CARTPTQ16568 116 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-215ENST00000470338 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 ALKBH6Q3KRA9 238 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 SLC18B1Q6NT16 456 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 OR2T4Q8NH00 348 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 ZNRF4Q8WWF5 429 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 IPCEF1Q8WWN9 437 aaPredicted RBP12.08□□□□□ -0.48
TOP3B-215ENST00000470338 SLC7A6Q92536 515 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 DCLRE1CQ96SD1 692 aaKnown RBP12.08□□□□□ -0.48
TOP3B-215ENST00000470338 COQ7Q99807 217 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 HDHD2Q9H0R4 259 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 NTN4Q9HB63 628 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 NKIRAS2Q9NYR9 191 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 CYB5R1Q9UHQ9 305 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 KCNG2Q9UJ96 466 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 POLR1DQ9Y2S0 133 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
TOP3B-215ENST00000470338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■■■□□ 17.1
TOP3B-215ENST00000470338 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 J3QW42 95 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 TLX2O43763 284 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-215ENST00000470338 E2F6O75461 281 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 NCR1O76036 304 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 HLA-DQA2P01906 255 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 DBHP09172 617 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 ANXA8P13928 327 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 PRKACGP22612 351 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 COL8A2P25067 703 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 PYCR1P32322 319 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 ERFP50548 548 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 SLC25A1P53007 311 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 MRPS11P82912 194 aaKnown RBP12.07□□□□□ -0.48
TOP3B-215ENST00000470338 CRMP1Q14194 572 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 PCGF3Q3KNV8 242 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 KRTAP27-1Q3LI81 207 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 TMEM154Q6P9G4 183 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 CORO6Q6QEF8 472 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.07□□□□□ -0.48
TOP3B-215ENST00000470338 HS3ST5Q8IZT8 346 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 PROKR2Q8NFJ6 384 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 TEX47Q8TBZ9 253 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 SNX33Q8WV41 574 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 RDH5Q92781 318 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
TOP3B-215ENST00000470338 NRBF2Q96F24 287 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 CDADC1Q9BWV3 514 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 BPESC1Q9GZL8 116 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 CMC2Q9NRP2 79 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 TANC2Q9HCD6 1990 aa12.07□□□□□ -0.48
TOP3B-215ENST00000470338 IGHV4-61A0A0C4DH41 118 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms