RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 APOBEC3AP31941 199 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 GLRXP35754 106 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 MTNR1AP48039 350 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF672Q499Z4 452 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 CCDC92Q53HC0 331 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF691Q5VV52 312 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF774Q6NX45 483 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 KCTD18Q6PI47 426 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ERI1Q8IV48 349 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 AKR7LQ8NHP1 331 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 OTOSQ8NHW6 89 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNRF4Q8WWF5 429 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 CYGBQ8WWM9 190 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ITFG2Q969R8 447 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 FBXW5Q969U6 566 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZMYND19Q96E35 227 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 FOXN4Q96NZ1 517 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 CNN2Q99439 309 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ATF6BQ99941 703 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 DHRS9Q9BPW9 319 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 NIPAL2Q9H841 368 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 NOX3Q9HBY0 568 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 CISD1Q9NZ45 108 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 RPL36Q9Y3U8 105 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 ABCA4P78363 2273 aa10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 FLNBO75369 2602 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-204ENST00000469778 IRGMA1A4Y4 181 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 RER1O15258 196 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 GPANK1O95872 356 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 CELA3BP08861 270 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 OR2T7P0C7T2 308 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 GABRB1P18505 474 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 ALOX5APP20292 161 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 APEX1P27695 318 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 VHLP40337 213 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 HTR5AP47898 357 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 EVX1P49640 407 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 UCP2P55851 309 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 SELENOVP59797 346 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 GRB2P62993 217 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 NKX6-1P78426 367 aaPredicted RBP10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 MOGQ16653 247 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 MEP1BQ16820 701 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 KRTAP27-1Q3LI81 207 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 DPY19L4Q7Z388 723 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 DCXRQ7Z4W1 244 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 ENTHD1Q8IYW4 607 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 C8orf59Q8N0T1 100 aaPredicted RBP10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 BBS1Q8NFJ9 593 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 OR5L1Q8NGL2 311 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 OR2T27Q8NH04 317 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 ST7LQ8TDW4 575 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 RNF133Q8WVZ7 376 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 NRG4Q8WWG1 115 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 AKAP1Q92667 903 aaKnown RBP eCLIP10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 HTRA1Q92743 480 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 C4orf45Q96LM5 186 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 LAMP5Q9UJQ1 280 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 ATP23Q9Y6H3 246 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 CENPEQ02224 2701 aa10.93□□□□□ -0.66
SPTLC1-204ENST00000469778 LOC100509620A0A075B734 347 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 C5orf49A4QMS7 147 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 CCDC182A6NF36 153 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ACOD1A6NK06 481 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ZNF878C9JN71 531 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ATP6V1G2-DDX39BF2Z307 99 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ENTPD6O75354 484 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 LYNP07948 512 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 SBK2P0C263 348 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 DCTDP32321 178 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 TPTEP56180 551 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ISL1P61371 349 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ACTC1P68032 377 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ACTA1P68133 377 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 IL5RAQ01344 420 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ROM1Q03395 351 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 HGFACQ04756 655 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 RAB40BQ12829 278 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 TAF13Q15543 124 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 KLHL22Q53GT1 634 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 AGAP6Q5VW22 663 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 CORO6Q6QEF8 472 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 DRAM2Q6UX65 266 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 CFAP77Q6ZQR2 320 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 USP51Q70EK9 711 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 KCTD20Q7Z5Y7 419 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 LILRB1Q8NHL6 650 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 NINJ1Q92982 152 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 UBE2FQ969M7 185 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 PIGTQ969N2 578 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 MRPL48Q96GC5 212 aaKnown RBP10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 MAP6Q96JE9 813 aa10.92□□□□□ -0.66
SPTLC1-204ENST00000469778 ABHD6Q9BV23 337 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms