RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TMEM38BQ9NVV0 291 aa18.12■□□□□ 0.49
TMEM53-207ENST00000468117 PLEKHB1Q9UF11 243 aaPredicted RBP18.12■□□□□ 0.49
TMEM53-207ENST00000468117 TMEM269A0A1B0GVZ9 245 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 ZNF879B4DU55 563 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 GATBO75879 557 aaKnown RBP18.11■□□□□ 0.49
TMEM53-207ENST00000468117 ADRB1P08588 477 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 B4GALT1P15291 398 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 ID4P47928 161 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 FAM27BQ5VT28 67 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 PAMR1Q6UXH9 720 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 UNQ9370/PRO34162Q6UXP9 181 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 LINC00299Q6ZSB3 139 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 NUFIP2Q7Z417 695 aaKnown RBP18.11■□□□□ 0.49
TMEM53-207ENST00000468117 NR2C2APQ86WQ0 139 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 OR51A4Q8NGJ6 313 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 SARAFQ96BY9 339 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 SH3GL3Q99963 347 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 BRD7Q9NPI1 651 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 ZNF175Q9Y473 711 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 LOC110117498-PIK3R3F6TDL0 507 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 DOK2O60496 412 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 UCHL1P09936 223 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 MYL9P24844 172 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 TEX19Q8NA77 164 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 FBXO17Q96EF6 278 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 FOXB1Q99853 325 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 NOX4Q9NPH5 578 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 G6PC2Q9NQR9 355 aa18.11■□□□□ 0.49
TMEM53-207ENST00000468117 CTDSP2O14595 271 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 ARL6IP5O75915 188 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 OCM2P0CE71 109 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 NPR2P20594 1047 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 SOX2P48431 317 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 TAF13Q15543 124 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 Q499Y3 187 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 KLHL24Q6TFL4 600 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 ADGRE4PQ86SQ3 457 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 SYT9Q86SS6 491 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 GJC3Q8NFK1 279 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 APH1AQ96BI3 265 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 LINC00470Q9BZP3 86 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 A0A075B6Q4 140 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 PIN1P1O15428 100 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 FCGR2AP12318 317 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 HSD11B1P28845 292 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 ZNF544Q6NX49 715 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 RPUSD3Q6P087 351 aaKnown RBP18.1■□□□□ 0.49
TMEM53-207ENST00000468117 RHOUQ7L0Q8 258 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 P4HA3Q7Z4N8 544 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 DERL3Q96Q80 235 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 TRIB1Q96RU8 372 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 AKIP1Q9NQ31 210 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 CLCF1Q9UBD9 225 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 OR52A1Q9UKL2 312 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 SLC5A6Q9Y289 635 aa18.1■□□□□ 0.49
TMEM53-207ENST00000468117 BMP4P12644 408 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 AGTR1P30556 359 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 MMP16P51512 607 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 OR10A3P58181 314 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 ZNF829Q3KNS6 432 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-207ENST00000468117 HSD17B12Q53GQ0 312 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 GPR148Q8TDV2 347 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 C12orf49Q9H741 205 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 SMURF1Q9HCE7 757 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 ZNF71Q9NQZ8 489 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-207ENST00000468117 FAM206AQ9NX38 181 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 CACNA1AO00555 2505 aa18.09■□□□□ 0.49
TMEM53-207ENST00000468117 TLN1Q9Y490 2541 aaKnown RBP18.08■□□□□ 0.49
TMEM53-207ENST00000468117 TRBV5-5A0A0J9YX44 114 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 IQCMA0A1B0GVH7 501 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 DCTDP32321 178 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 S100A5P33763 92 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 PRKXP51817 358 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 CXADRP78310 365 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 C9orf135Q5VTT2 229 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 ZNF100Q8IYN0 542 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 SLC22A24Q8N4F4 322 aa18.08■□□□□ 0.49
TMEM53-207ENST00000468117 RGS5O15539 181 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 UCNP55089 124 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 HIST1H3AP68431 136 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 GALK2Q01415 458 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 HIST2H3PS2Q5TEC6 136 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 HIST2H3AQ71DI3 136 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 UBE2J2Q8N2K1 259 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 CRNNQ9UBG3 495 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-207ENST00000468117 UPB1Q9UBR1 384 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 PEX16Q9Y5Y5 336 aa18.08■□□□□ 0.48
TMEM53-207ENST00000468117 TRAV1-2A0A0B4J238 106 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 ANKRD61A6NGH8 418 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 OR6C65A6NJZ3 312 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 CLDN25C9JDP6 229 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF587BE7ETH6 402 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 J3QRK9 145 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 PATE4P0C8F1 98 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 SRMP19623 302 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 FOXG1P55316 489 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-207ENST00000468117 INAQ16352 499 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 CCDC92Q53HC0 331 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-207ENST00000468117 BCL2L15Q5TBC7 163 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF813Q6ZN06 617 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms