RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 EMX1Q04741 257 aaPredicted RBP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ST3GAL4Q11206 333 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ZP4Q12836 540 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MYBPHQ13203 477 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 CRMP1Q14194 572 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MS4A18Q3C1V0 323 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 NADK2Q4G0N4 442 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 KLHL22Q53GT1 634 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF766Q5HY98 468 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PXDC1Q5TGL8 231 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 NXNL2Q5VZ03 156 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 GPR139Q6DWJ6 353 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 C11orf87Q6NUJ2 197 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 IGFL2Q6UWQ7 119 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 TMPPEQ6ZT21 453 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MEPCEQ7L2J0 689 aaKnown RBP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 FAM122BQ7Z309 247 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 GALNTL5Q7Z4T8 443 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 SATL1Q86VE3 508 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 GID4Q8IVV7 300 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 SCAIQ8N9R8 606 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 CYB561A3Q8NBI2 242 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM178AQ8NBL3 297 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 SLC37A3Q8NCC5 494 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 FAM83FQ8NEG4 500 aaPredicted RBP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 BBS1Q8NFJ9 593 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PTP4A1Q93096 173 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 RASD2Q96D21 266 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 RNFT2Q96EX2 444 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 SCMH1Q96GD3 660 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM80Q96HE8 168 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 Q96M85 177 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 OR2B2Q9GZK3 357 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MED20Q9H944 212 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 VCX3AQ9NNX9 186 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 CHST11Q9NPF2 352 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ALKBH4Q9NXW9 302 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ELOVL5Q9NYP7 299 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MSRB1Q9NZV6 116 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 B4GALT7Q9UBV7 327 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 TRAPPC4Q9Y296 219 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PCNX3Q9H6A9 2034 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 DOCK10Q96BY6 2186 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TEX13CA0A0J9YWL9 993 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 IRGMA1A4Y4 181 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 GJE1A6NN92 205 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 FAM166BA8MTA8 275 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 SULT2B1O00204 365 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 SERPINI2O75830 405 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 AKR7A3O95154 331 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 PMS2P2O95744 297 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 HPNP05981 417 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 PCMT1P22061 227 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 C21orf33P30042 268 aaPredicted RBP6.47□□□□□ -1.37
UBE4B-204ENST00000462658 HTR1FP30939 366 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 RFC3P40938 356 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 CDKN2AP42771 156 aaKnown RBP6.47□□□□□ -1.37
UBE4B-204ENST00000462658 MAP2K4P45985 399 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 MTNR1AP48039 350 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TNFSF10P50591 281 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 SLC35A1P78382 337 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 PUDPQ08623 228 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 NEDD8Q15843 81 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 KLHL12Q53G59 568 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 XAF1Q6GPH4 301 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 NIPAL3Q6P499 406 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 LEG1Q6P5S2 330 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 KDM8Q8N371 416 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM251Q8N6I4 163 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 ARIH2OSQ8N7S6 290 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM99Q8N816 258 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 LSM14AQ8ND56 463 aaKnown RBP6.47□□□□□ -1.37
UBE4B-204ENST00000462658 NPEPL1Q8NDH3 523 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 SDR9C7Q8NEX9 313 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 OR52I1Q8NGK6 324 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 C9orf43Q8TAL5 461 aaPredicted RBP6.47□□□□□ -1.37
UBE4B-204ENST00000462658 SMPDL3BQ92485 455 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 MIB2Q96AX9 1013 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TMIGD2Q96BF3 282 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 LGALS12Q96DT0 336 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 KLHL15Q96M94 604 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 SFXN2Q96NB2 322 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TSPAN32Q96QS1 320 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 NMNAT3Q96T66 252 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 DDOQ99489 341 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TEAD3Q99594 435 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 HCAR1Q9BXC0 346 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TTTY12Q9BZ98 90 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 OR51V1Q9H2C8 321 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 TXNIPQ9H3M7 391 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 NDUFA13Q9P0J0 144 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 WARS2Q9UGM6 360 aaKnown RBP6.47□□□□□ -1.37
UBE4B-204ENST00000462658 B3GALT5Q9Y2C3 310 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 MED13Q9UHV7 2174 aa6.47□□□□□ -1.37
UBE4B-204ENST00000462658 CFAP46Q8IYW2 2715 aa6.46□□□□□ -1.38
UBE4B-204ENST00000462658 TRAV17A0A0B4J275 112 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms