RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 NMNAT2Q9BZQ4 307 aa12.64□□□□□ -0.39
NCK1-202ENST00000460960 SLC25A19Q9HC21 320 aa12.64□□□□□ -0.39
NCK1-202ENST00000460960 POLE4Q9NR33 117 aa12.64□□□□□ -0.39
NCK1-202ENST00000460960 CMC2Q9NRP2 79 aa12.64□□□□□ -0.39
NCK1-202ENST00000460960 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
NCK1-202ENST00000460960 SURF4O15260 269 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 KHDRBS3O75525 346 aaKnown RBP12.63□□□□□ -0.39
NCK1-202ENST00000460960 RENP00797 406 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 TFP02787 698 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 CECR9P0C854 216 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 IL2RGP31785 369 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
NCK1-202ENST00000460960 CHN2P52757 468 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 ACTG1P63261 375 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 ZIK1Q3SY52 487 aaPredicted RBP12.63□□□□□ -0.39
NCK1-202ENST00000460960 LPCAT4Q643R3 524 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 ZBTB46Q86UZ6 589 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 C10orf67Q8IYJ2 551 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 BBS1Q8NFJ9 593 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 DNAJC9Q8WXX5 260 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 C11orf40Q8WZ69 217 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 PTP4A1Q93096 173 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 SNX18Q96RF0 628 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 MBOAT4Q96T53 435 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 RBM4BQ9BQ04 359 aaKnown RBP12.63□□□□□ -0.39
NCK1-202ENST00000460960 GABARAPL3Q9BY60 117 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 RAB1BQ9H0U4 201 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 RIBC2Q9H4K1 309 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 SIAEQ9HAT2 523 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 HINT3Q9NQE9 182 aaKnown RBP12.63□□□□□ -0.39
NCK1-202ENST00000460960 CA10Q9NS85 328 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
NCK1-202ENST00000460960 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
NCK1-202ENST00000460960 TVP23AA6NH52 213 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 B9A039 149 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 PRKYO43930 277 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 IGKV3-15P01624 115 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 OR4A8P0C604 315 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
NCK1-202ENST00000460960 CBR1P16152 277 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 ZNF14P17017 642 aaPredicted RBP12.62□□□□□ -0.39
NCK1-202ENST00000460960 ZNF32P17041 273 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 PEX2P28328 305 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 CALCRP30988 508 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 RPS27P42677 84 aaKnown RBP12.62□□□□□ -0.39
NCK1-202ENST00000460960 CENPAP49450 140 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 RAB1AP62820 205 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 RAB39AQ14964 217 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 LRRC36Q1X8D7 754 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 SLX4IPQ5VYV7 408 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 C12orf73Q69YU5 71 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 SLC16A14Q7RTX9 510 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
NCK1-202ENST00000460960 GLB1L2Q8IW92 636 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
NCK1-202ENST00000460960 SLC26A10Q8NG04 563 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 AKR7LQ8NHP1 331 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 FNDC8Q8TC99 324 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 SLC38A2Q96QD8 506 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 OBP2BQ9NPH6 170 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 KLHL21Q9UJP4 597 aa12.62□□□□□ -0.39
NCK1-202ENST00000460960 RIIAD1A6NNX1 92 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 E9PQ18 207 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 DLGAP1O14490 977 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 RGS9O75916 674 aaPredicted RBP12.61□□□□□ -0.39
NCK1-202ENST00000460960 SNAP29O95721 258 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 CRYAAP02489 173 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 ERCC1P07992 297 aaPredicted RBP12.61□□□□□ -0.39
NCK1-202ENST00000460960 NR2C1P13056 603 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 CCL2P13500 99 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 DAOP14920 347 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 SPI1P17947 270 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 MSR1P21757 451 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 ALDH3A2P51648 485 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 ESRRGP62508 458 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 PLBD1Q6P4A8 553 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
NCK1-202ENST00000460960 PAQR4Q8N4S7 273 aaPredicted RBP12.61□□□□□ -0.39
NCK1-202ENST00000460960 ZNF511Q8NB15 262 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 C9orf16Q9BUW7 83 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 TOR3AQ9H497 397 aa12.61□□□□□ -0.39
NCK1-202ENST00000460960 METTL17Q9H7H0 456 aaPredicted RBP12.61□□□□□ -0.39
NCK1-202ENST00000460960 UBL3O95164 117 aa12.6□□□□□ -0.39
NCK1-202ENST00000460960 VENTXO95231 258 aa12.6□□□□□ -0.39
NCK1-202ENST00000460960 FARS2O95363 451 aaKnown RBP12.6□□□□□ -0.39
NCK1-202ENST00000460960 IFNGP01579 166 aa12.6□□□□□ -0.39
NCK1-202ENST00000460960 CST2P09228 141 aa12.6□□□□□ -0.39
NCK1-202ENST00000460960 ZNF3P17036 446 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms