RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 RAF1P04049 648 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 SPARCP09486 303 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 GABRB1P18505 474 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 TTKP33981 857 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 THBS4P35443 961 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 GLRXP35754 106 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 WNT5AP41221 380 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 HTR5AP47898 357 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 GDI2P50395 445 aaKnown RBP12.19□□□□□ -0.46
SMPD4-215ENST00000457039 SNTB2Q13425 540 aaKnown RBP12.19□□□□□ -0.46
SMPD4-215ENST00000457039 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 RSPO1Q2MKA7 263 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-215ENST00000457039 MEPCEQ7L2J0 689 aaKnown RBP12.19□□□□□ -0.46
SMPD4-215ENST00000457039 CDH24Q86UP0 819 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 DTX2Q86UW9 622 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 ERI1Q8IV48 349 aaKnown RBP12.19□□□□□ -0.46
SMPD4-215ENST00000457039 OR2AJ1Q8NGZ0 328 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 FAM81AQ8TBF8 368 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 ST7LQ8TDW4 575 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 NRG4Q8WWG1 115 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 SLC7A6Q92536 515 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 NINJ1Q92982 152 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 UBE2FQ969M7 185 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 INTS14Q96SY0 518 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 CDH20Q9HBT6 801 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 PLEKHA6Q9Y2H5 1048 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 GMPPBQ9Y5P6 360 aa12.19□□□□□ -0.46
SMPD4-215ENST00000457039 RTTNQ86VV8 2226 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 C5orf49A4QMS7 147 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 H0YHG0 523 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 GPRIN2O60269 458 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 SELENOFO60613 162 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 SMPD2O60906 423 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 TMCC2O75069 709 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 CD8AP01732 235 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-215ENST00000457039 FABP6P51161 128 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 RPS7P62081 194 aaKnown RBP12.18□□□□□ -0.46
SMPD4-215ENST00000457039 SNRPGP62308 76 aaKnown RBP12.18□□□□□ -0.46
SMPD4-215ENST00000457039 GALK2Q01415 458 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 RIPK1Q13546 671 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 KEAP1Q14145 624 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 ADIPOQQ15848 244 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 MSMPQ1L6U9 139 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 SLC25A30Q5SVS4 291 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 C11orf71Q6IPW1 123 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 DCXRQ7Z4W1 244 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 GID4Q8IVV7 300 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 ZNF101Q8IZC7 436 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 OR6N2Q8NGY6 317 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 ATF6BQ99941 703 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 TRAF4Q9BUZ4 470 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-215ENST00000457039 DDX28Q9NUL7 540 aaKnown RBP12.18□□□□□ -0.46
SMPD4-215ENST00000457039 HAO2Q9NYQ3 351 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
SMPD4-215ENST00000457039 ANKRD17O75179 2603 aaKnown RBP12.18□□□□□ -0.46
SMPD4-215ENST00000457039 SLC22A31A6NKX4 558 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 DBHP09172 617 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 FAM157BP0CG42 384 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 CCNOP22674 350 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 UCP2P55851 309 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 ECH1Q13011 328 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 MST1LQ2TV78 715 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 LCN1P1Q5VSP4 162 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 SHFQ7M4L6 423 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 ENTHD1Q8IYW4 607 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 MUC15Q8N387 334 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 OTOSQ8NHW6 89 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 C4orf45Q96LM5 186 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 ZNF582Q96NG8 517 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-215ENST00000457039 DCLRE1CQ96SD1 692 aaKnown RBP12.17□□□□□ -0.46
SMPD4-215ENST00000457039 AMELYQ99218 206 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 CCL19Q99731 98 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 FAIMQ9NVQ4 179 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 IMPAD1Q9NX62 359 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 H2AFY2Q9P0M6 372 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-215ENST00000457039 EDARQ9UNE0 448 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
SMPD4-215ENST00000457039 OVOL3O00110 214 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 NGFP01138 241 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 OR4A8P0C604 315 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 HTR1FP30939 366 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 OTX1P32242 354 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 SERPINF1P36955 418 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 NAA10P41227 235 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 RAD52P43351 418 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 ERVS71-1P61550 626 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 RPS23P62266 143 aaKnown RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 ADARB1P78563 741 aaKnown RBP12.16□□□□□ -0.46
SMPD4-215ENST00000457039 EFNB3Q15768 340 aa12.16□□□□□ -0.46
SMPD4-215ENST00000457039 OCLNQ16625 522 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms