RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NKAIN1Q4KMZ8 207 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 SLC35D3Q5M8T2 416 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TFAP2EQ6VUC0 442 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF440Q8IYI8 595 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 MAML2Q8IZL2 1156 aaPredicted RBP11.13□□□□□ -0.63
LINC00959-201ENST00000456581 OR1J2Q8NGS2 313 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 CCDC74BQ96LY2 380 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 COPS7AQ9UBW8 275 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 FRYQ5TBA9 3013 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 SPARCP09486 303 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TACSTD2P09758 323 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 DLX5P56178 289 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 PRPS1P60891 318 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 DEFA5Q01523 94 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 BIKQ13323 160 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 DMRTC1Q5HYR2 192 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 PHF19Q5T6S3 580 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 RHBDD2Q6NTF9 364 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 FAM3DQ96BQ1 224 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 CMBLQ96DG6 245 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 ZC3H10Q96K80 434 aaKnown RBP11.13□□□□□ -0.63
LINC00959-201ENST00000456581 TBL1XR1Q9BZK7 514 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 HIF3AQ9Y2N7 669 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 HRH3Q9Y5N1 445 aa11.13□□□□□ -0.63
LINC00959-201ENST00000456581 FGF2P09038 288 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 CAPZA2P47755 286 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 FBXW4P57775 412 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 GK2Q14410 553 aaPredicted RBP11.12□□□□□ -0.63
LINC00959-201ENST00000456581 LY6G6FQ5SQ64 297 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 ANKRD16Q6P6B7 361 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 SLC29A4Q7RTT9 530 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 APCDD1LQ8NCL9 501 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 OR11A1Q9GZK7 315 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 EMC3Q9P0I2 261 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 PHF3Q92576 2039 aaKnown RBP11.12□□□□□ -0.63
LINC00959-201ENST00000456581 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
LINC00959-201ENST00000456581 ASAH2BP0C7U1 165 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 PNMTP11086 282 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 RNF4P78317 190 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 SPOCK1Q08629 439 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 CD163Q86VB7 1156 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 WDFY1Q8IWB7 410 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 GPR148Q8TDV2 347 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 EDAQ92838 391 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 C4orf45Q96LM5 186 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 ZC4H2Q9NQZ6 224 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
LINC00959-201ENST00000456581 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
LINC00959-201ENST00000456581 TRBV5-7A0A0A0MS05 114 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 SULT1B1O43704 296 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF254O75437 659 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 IL5P05113 134 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 CD1AP06126 327 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 TDGF1P13385 188 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 GLYATL3Q5SZD4 288 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 STEAP1BQ6NZ63 245 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 OR1J4Q8NGS1 313 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 INTS14Q96SY0 518 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 COMMD4Q9H0A8 199 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 PFDN2Q9UHV9 154 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 MRPS18BQ9Y676 258 aaKnown RBP11.11□□□□□ -0.63
LINC00959-201ENST00000456581 MYO7BQ6PIF6 2116 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 TMEM235A6NFC5 223 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 OR6C65A6NJZ3 312 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 SHISA8B8ZZ34 492 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 HEXBP07686 556 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 IL11P20809 199 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 ANKRD37Q7Z713 158 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 KMT5CQ86Y97 462 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 CARFQ8N187 725 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF441Q8N8Z8 693 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 CLEC1AQ8NC01 280 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 ACBD4Q8NC06 268 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 FAM46BQ96A09 425 aa11.11□□□□□ -0.63
LINC00959-201ENST00000456581 NARS2Q96I59 477 aaKnown RBP11.11□□□□□ -0.63
LINC00959-201ENST00000456581 SAV1Q9H4B6 383 aaPredicted RBP11.11□□□□□ -0.63
LINC00959-201ENST00000456581 ZNF275Q9NSD4 429 aaPredicted RBP11.11□□□□□ -0.63
LINC00959-201ENST00000456581 FAM25EA8MYX2 175 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 LAMTOR5O43504 91 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 SLC16A7O60669 478 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 B3GALNT1O75752 331 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 TPPPO94811 219 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 AMY2AP04746 511 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 CXCR1P25024 350 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 PRSS3P35030 304 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
LINC00959-201ENST00000456581 RNF144BQ7Z419 303 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 GABRG1Q8N1C3 465 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 OR6N1Q8NGY5 312 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 MCHR2Q969V1 340 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 GPX7Q96SL4 187 aaPredicted RBP11.1□□□□□ -0.63
LINC00959-201ENST00000456581 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
LINC00959-201ENST00000456581 DUSP23Q9BVJ7 150 aa11.1□□□□□ -0.63
LINC00959-201ENST00000456581 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms