RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ZFP3Q96NJ6 502 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 SFXN3Q9BWM7 321 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
SCN9A-205ENST00000454569 LAMP5Q9UJQ1 280 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 GDF2Q9UK05 429 aaPredicted RBP9.6□□□□□ -0.87
SCN9A-205ENST00000454569 FBXL3Q9UKT7 428 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 GRIP1Q9Y3R0 1128 aa9.6□□□□□ -0.87
SCN9A-205ENST00000454569 OR6C65A6NJZ3 312 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 HSPB2A8KAH6 182 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 A8MXE2 369 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 J3QLW9 94 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 ABHD16AO95870 558 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 MMP7P09237 267 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF19P17023 458 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 COX5AP20674 150 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 PSMB9P28065 219 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 PSMB10P40306 273 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 BLVRAP53004 296 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 LSM6P62312 80 aaKnown RBP9.59□□□□□ -0.87
SCN9A-205ENST00000454569 FAM27E3Q08E93 113 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 HSPB2Q16082 182 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 CDONQ4KMG0 1287 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF322Q6U7Q0 402 aaPredicted RBP9.59□□□□□ -0.87
SCN9A-205ENST00000454569 GALNT11Q8NCW6 608 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 AKR7LQ8NHP1 331 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 HSD17B8Q92506 261 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 RND1Q92730 232 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 CCDC120Q96HB5 630 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 C4orf36Q96KX1 117 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 CDADC1Q9BWV3 514 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 JKAMPQ9P055 326 aa9.59□□□□□ -0.87
SCN9A-205ENST00000454569 EXOSC1Q9Y3B2 195 aaKnown RBP9.59□□□□□ -0.87
SCN9A-205ENST00000454569 TMEM129A0AVI4 362 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 C5orf63A6NC05 138 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 EEF1E1-BLOC1S5C9J1V9 151 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF670-ZNF695F2Z2N8 137 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 H3BSA7 217 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 EEF1E1O43324 174 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 DOK2O60496 412 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 NOL3O60936 208 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 PNPP00491 289 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CST2P09228 141 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 NR2C1P13056 603 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 NPR2P20594 1047 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 PSG4Q00888 419 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 MED22Q15528 200 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 TBRG1Q3YBR2 411 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 UBE2UQ5VVX9 321 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 TMEM211Q6ICI0 200 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF774Q6NX45 483 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 STAC2Q6ZMT1 411 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 SLC16A14Q7RTX9 510 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 NAA40Q86UY6 237 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 MYPOPQ86VE0 399 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 KLBQ86Z14 1044 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CLVS1Q8IUQ0 354 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 WDR31Q8NA23 367 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CPEB3Q8NE35 698 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 OR52N5Q8NH56 324 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 DGCR14Q96DF8 476 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 SLAMF6Q96DU3 332 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 PELI1Q96FA3 418 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF75AQ96N20 296 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 OPALINQ96PE5 141 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 OR8B4Q96RC9 309 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 WNT5BQ9H1J7 359 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ACOXLQ9NUZ1 547 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ZNF629Q9UEG4 869 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 RSL24D1Q9UHA3 163 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 SLC5A6Q9Y289 635 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CEPT1Q9Y6K0 416 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 PNMA8CA0A1B0GUJ8 204 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 NKX2-6A6NCS4 301 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 MSTNO14793 375 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 RPP14O95059 124 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 AGFG2O95081 481 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 DBHP09172 617 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 MYL12AP19105 171 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CCKARP32238 428 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 OPRM1P35372 400 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 LIPAP38571 399 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CASP6P55212 293 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 WNT4P56705 351 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 NANOS3P60323 173 aaKnown RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 HGFACQ04756 655 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 SPHARQ15513 63 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 STK11Q15831 433 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 SFRP5Q5T4F7 317 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 SYT6Q5T7P8 510 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 GPR107Q5VW38 600 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 OR7E24Q6IFN5 339 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ANKRD16Q6P6B7 361 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 KLHL36Q8N4N3 616 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 RNF133Q8WVZ7 376 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 MYCBPQ99417 103 aaPredicted RBP9.58□□□□□ -0.88
SCN9A-205ENST00000454569 MND1Q9BWT6 205 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 C1QTNF6Q9BXI9 259 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 ELOVL3Q9HB03 270 aa9.58□□□□□ -0.88
SCN9A-205ENST00000454569 CENPMQ9NSP4 180 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms