RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 C3P1Q6ZMU1 363 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 EIF4E3Q8N5X7 224 aaKnown RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 TMEM251Q8N6I4 163 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 TMEM99Q8N816 258 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 OR5J2Q8NH18 312 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 KISS1RQ969F8 398 aaPredicted RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 OR5B2Q96R09 309 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 SHARPINQ9H0F6 387 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 CMC2Q9NRP2 79 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 HIF3AQ9Y2N7 669 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 CSAG2Q9Y5P2 127 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 CACNA1AO00555 2505 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 A0A1W2PRG6 482 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 PLSCR5A0PG75 271 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 PSMB1P20618 241 aaKnown RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 GRPRP30550 384 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 MNDAP41218 407 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 MAGEA5P43359 124 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 B3GALT5-AS1P59052 145 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 RPS4XP62701 263 aaKnown RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 DGCR2P98153 550 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 LTBQ06643 244 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 MYBPHQ13203 477 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 OR7A5Q15622 319 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 ARL9Q6T311 187 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 LSRQ86X29 649 aaPredicted RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 SMPDL3BQ92485 455 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 DNAJA3Q96EY1 480 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 ARL5BQ96KC2 179 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 PGLYRP3Q96LB9 341 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 MCCC2Q9HCC0 563 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 GPN1Q9HCN4 374 aaPredicted RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 SDHAF2Q9NX18 166 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 ALKBH4Q9NXW9 302 aa14.15□□□□□ -0.14
SNX17-204ENST00000453453 ING1Q9UK53 422 aaPredicted RBP14.15□□□□□ -0.14
SNX17-204ENST00000453453 LIPT2A6NK58 231 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 GABARAPH6UMI1 98 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 BHLHE40O14503 412 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 OGG1O15527 345 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 CD3GP09693 182 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 EPXP11678 715 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 IFNGR1P15260 489 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 ATF4P18848 351 aaPredicted RBP14.14□□□□□ -0.15
SNX17-204ENST00000453453 POU3F2P20265 443 aaPredicted RBP14.14□□□□□ -0.15
SNX17-204ENST00000453453 MAPK3P27361 379 aaPredicted RBP14.14□□□□□ -0.15
SNX17-204ENST00000453453 SRP9P49458 86 aaKnown RBP14.14□□□□□ -0.15
SNX17-204ENST00000453453 TSPAN5P62079 268 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 SLC10A1Q14973 349 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 SGCBQ16585 318 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 ACSM3Q53FZ2 586 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 ALG10Q5BKT4 473 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 TFAP2EQ6VUC0 442 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 HSD17B13Q7Z5P4 300 aaPredicted RBP14.14□□□□□ -0.15
SNX17-204ENST00000453453 SYS1Q8N2H4 156 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 EXTL1Q92935 676 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 MRPL48Q96GC5 212 aaKnown RBP14.14□□□□□ -0.15
SNX17-204ENST00000453453 KLHL15Q96M94 604 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 IL20RAQ9UHF4 553 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 SLC6A5Q9Y345 797 aa14.14□□□□□ -0.15
SNX17-204ENST00000453453 A0A1B0GW55 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 MED19A0JLT2 244 aaPredicted RBP14.13□□□□□ -0.15
SNX17-204ENST00000453453 HMSDA8MTL9 139 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 A8MXK9 166 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 FTCDNL1E5RQL4 147 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 SULT2B1O00204 365 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 TOR1AO14656 332 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 MTRF1O75570 445 aaKnown RBP14.13□□□□□ -0.15
SNX17-204ENST00000453453 RGS11O94810 467 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 OR2A4O95047 310 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 CFDP00746 253 aaPredicted RBP14.13□□□□□ -0.15
SNX17-204ENST00000453453 UCHL1P09936 223 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4L2P0CJ85 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4L3P0CJ86 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4L4P0CJ87 422 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4L5P0CJ88 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4L6P0CJ89 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4L7P0CJ90 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 NOS3P29474 1203 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 OR10A3P58181 314 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 FXYD6P3P58550 94 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 CSNK2A1P68400 391 aaPredicted RBP14.13□□□□□ -0.15
SNX17-204ENST00000453453 SLC35A1P78382 337 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 PDSS1Q5T2R2 415 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 RGS7BPQ6MZT1 257 aaPredicted RBP14.13□□□□□ -0.15
SNX17-204ENST00000453453 PLBD1Q6P4A8 553 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 ARHGAP11AQ6P4F7 1023 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 B3GLCTQ6Y288 498 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DPY19L2P2Q6ZN68 376 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 SCARB1Q8WTV0 552 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 SLC39A7Q92504 469 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 RELTQ969Z4 430 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 OR2A7Q96R45 310 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 LDAHQ9H6V9 325 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 METTL17Q9H7H0 456 aaPredicted RBP14.13□□□□□ -0.15
SNX17-204ENST00000453453 ZC4H2Q9NQZ6 224 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 DUX4Q9UBX2 424 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 PFDN2Q9UHV9 154 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 FREM2Q5SZK8 3169 aa14.13□□□□□ -0.15
SNX17-204ENST00000453453 A0A1W2PNR3 127 aa14.12□□□□□ -0.15
SNX17-204ENST00000453453 PRR23D1E9PI22 279 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms