RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 C12orf49Q9H741 205 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 ERVMER34-1Q9H9K5 563 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 UNKLQ9H9P5 680 aaKnown RBP20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 IGHV1OR21-1A0A087WYE8 117 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 CXCL13O43927 109 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 CCL7P80098 99 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 COMTD1Q86VU5 262 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 OR5T1Q8NG75 326 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 OR1L3Q8NH93 324 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 TTC9Q92623 222 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 KCNJ16Q9NPI9 418 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 GLTPQ9NZD2 209 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 FLVCR2Q9UPI3 526 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 CCSO14618 274 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 FOLR1P15328 257 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 GABRB1P18505 474 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 MRM1Q6IN84 353 aaKnown RBP20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 SEMA6DQ8NFY4 1073 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 PELI1Q96FA3 418 aa20.31■□□□□ 0.84
CTDSPL-206ENST00000443503 CD300LDQ6UXZ3 194 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 GPR173Q9NS66 373 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 TRAPPC2LQ9UL33 140 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 IL10RAQ13651 578 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 HLA-BQ31612 363 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 DMRTC1Q5HYR2 192 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 CBLN3Q6UW01 205 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 C1orf123Q9NWV4 160 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 MYOFQ9NZM1 2061 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 IGHV1OR15-9A0A0B4J2B8 117 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 ANKRD33BA6NCL7 494 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 M0R135 149 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 TBXA2RP21731 343 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 IAH1Q2TAA2 248 aaPredicted RBP20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 TMEM178AQ8NBL3 297 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 OR4D6Q8NGJ1 314 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 APH1AQ96BI3 265 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 LRRC46Q96FV0 321 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 ZNF799Q96GE5 643 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 SHISA8B8ZZ34 492 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 ZNF728P0DKX0 622 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 SPNP16150 400 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 OMGP23515 440 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 CCL11P51671 97 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 RPL23AP62750 156 aaKnown RBP20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 VHLLQ6RSH7 139 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 CADM4Q8NFZ8 388 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 NUDCD2Q8WVJ2 157 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 HRASLSQ9HDD0 168 aa20.3■□□□□ 0.84
CTDSPL-206ENST00000443503 ARPC3O15145 178 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 KIR2DL3P43628 341 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 RAB5BP61020 215 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 UBE2MP61081 183 aaKnown RBP20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 ERVK-16P61578 105 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 ZNF117Q03924 483 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 ZNF529Q6P280 563 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 IGHV3-15A0A0B4J1V0 119 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 POU2F2P09086 479 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 EDN3P14138 238 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 RAB6AP20340 208 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 MC2RQ01718 297 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 ABHD5Q8WTS1 349 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 LRFN1Q9P244 771 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 KLK11Q9UBX7 282 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 DCTDP32321 178 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 GABRG1Q8N1C3 465 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 ZNF764Q96H86 408 aaPredicted RBP20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 OXGR1Q96P68 337 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 POFUT1Q9H488 388 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 SCPEP1Q9HB40 452 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 LHX6Q9UPM6 363 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 R4GMQ9 66 aa20.29■□□□□ 0.84
CTDSPL-206ENST00000443503 ZNF780AO75290 641 aaPredicted RBP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 NTN1O95631 604 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 AADACL4Q5VUY2 407 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 GUSBP11Q6P575 273 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 OGFOD3Q6PK18 319 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 SLAMF9Q96A28 289 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 MUCL1Q96DR8 90 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 SPACA9Q96E40 222 aaPredicted RBP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 OR6C68A6NDL8 312 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 C16orf47Q6ZP98 133 aaPredicted RBP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 UBALD2Q8IYN6 164 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 TAAR8Q969N4 342 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 LSM11P83369 360 aaKnown RBP eCLIP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 MFGE8Q08431 387 aaPredicted RBP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 LTC4SQ16873 150 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 FJX1Q86VR8 437 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 MFSD4AQ8N468 514 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 ZCCHC4Q9H5U6 513 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 GLI4P10075 376 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 GZMMP51124 257 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 MDGA2Q7Z553 956 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 SP7Q8TDD2 431 aaPredicted RBP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 PCED1AQ9H1Q7 454 aa20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.28■□□□□ 0.84
CTDSPL-206ENST00000443503 TDRD15B5MCY1 1934 aaKnown RBP20.27■□□□□ 0.84
CTDSPL-206ENST00000443503 TNS1Q9HBL0 1735 aaKnown RBP20.27■□□□□ 0.84
CTDSPL-206ENST00000443503 A0A0A6YYJ9 748 aa20.27■□□□□ 0.84
CTDSPL-206ENST00000443503 ATF1P18846 271 aa20.27■□□□□ 0.84
CTDSPL-206ENST00000443503 RFC3P40938 356 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms