RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MIOXQ9UGB7 285 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 NPIPA1Q9UND3 350 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 ALG5Q9Y673 324 aa7.22□□□□□ -1.25
CCDC39-201ENST00000442201 C9orf170A2RU37 121 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 A6NIZ1 184 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 TTLL8A6PVC2 850 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 H7C1C5 153 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 MPC2O95563 127 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 IGHA1P01876 353 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 SBK2P0C263 348 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 HLA-DOBP13765 273 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 CD36P16671 472 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 MEOX1P50221 254 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 TNFSF10P50591 281 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 RAP1BP61224 184 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 LCN6P62502 163 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 RAP1AP62834 184 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 PAN3Q58A45 887 aaKnown RBP7.21□□□□□ -1.25
CCDC39-201ENST00000442201 ARMCX4Q5H9R4 360 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 PAMR1Q6UXH9 720 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 SLC35D2Q76EJ3 337 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 OR6K6Q8NGW6 343 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 ZNF519Q8TB69 540 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 ZMYND19Q96E35 227 aaPredicted RBP7.21□□□□□ -1.25
CCDC39-201ENST00000442201 MGLLQ99685 303 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 SYT4Q9H2B2 425 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 ERVK13-1Q9NX77 482 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 ADAM30Q9UKF2 790 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 WASF3Q9UPY6 502 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 MOKQ9UQ07 419 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 MSRB2Q9Y3D2 182 aa7.21□□□□□ -1.25
CCDC39-201ENST00000442201 FREM2Q5SZK8 3169 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 A0A0J9YW62 118 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 TMEM129A0AVI4 362 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 PRSS37A4D1T9 235 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 FAM166BA8MTA8 275 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 GLCEO94923 617 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 SLC34A2O95436 690 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 HPNP05981 417 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 LIMS3P0CW19 117 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 LIMS4P0CW20 117 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 IFNGR1P15260 489 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 KIR2DL3P43628 341 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 MELKQ14680 651 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF79Q15937 498 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ZNF239Q16600 458 aaKnown RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 TATDN3Q17R31 274 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 NHLRC3Q5JS37 347 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 IGFL2Q6UWQ7 119 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 HSD17B13Q7Z5P4 300 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 LHFPL3Q86UP9 236 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 UEVLDQ8IX04 471 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 PRR18Q8N4B5 295 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 POMGNT2Q8NAT1 580 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ZFP62Q8NB50 900 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 TSSK2Q96PF2 358 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 JAM3Q9BX67 310 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 SRA1Q9HD15 236 aaKnown RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 AQP7P3A6NL99 342 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 DNPH1O43598 174 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 HLA-DQB1P01920 261 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 FCER2P06734 321 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 MRPL3P09001 348 aaKnown RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 POU3F2P20265 443 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 WNT4P56705 351 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ACTC1P68032 377 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ACTA1P68133 377 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 SCN1BQ07699 218 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 C17orf107Q6ZR85 190 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ESPNLQ6ZVH7 1005 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 TMEM251Q8N6I4 163 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 EXD3Q8N9H8 876 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 OR10H4Q8NGA5 316 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 SCMH1Q96GD3 660 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 OXGR1Q96P68 337 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 CNN2Q99439 309 aaKnown RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 NAA11Q9BSU3 229 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ALG12Q9BV10 488 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 RERGLQ9H628 205 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 ADGRL4Q9HBW9 690 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 INPP5EQ9NRR6 644 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 B3GAT1Q9P2W7 334 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 MLXQ9UH92 298 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 LSM2Q9Y333 95 aaKnown RBP7.21□□□□□ -1.26
CCDC39-201ENST00000442201 PCDHGB7Q9Y5F8 929 aa7.21□□□□□ -1.26
CCDC39-201ENST00000442201 MED13Q9UHV7 2174 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 MPDZO75970 2070 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 A0A1B0GV90 55 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 DAPL1A0PJW8 107 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 J3QRE1 110 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 ACOT7O00154 380 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 EIF1AYO14602 144 aaKnown RBP7.2□□□□□ -1.26
CCDC39-201ENST00000442201 TNFSF11O14788 317 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 CEACAM4O75871 244 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 GLSO94925 669 aaPredicted RBP7.2□□□□□ -1.26
CCDC39-201ENST00000442201 MUC1P15941 1255 aaPredicted RBP7.2□□□□□ -1.26
CCDC39-201ENST00000442201 PYCR1P32322 319 aa7.2□□□□□ -1.26
CCDC39-201ENST00000442201 MAGEA5P43359 124 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 318.2 ms