RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PLEKHA1Q9HB21 404 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 GP6Q9HCN6 339 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 CYSLTR2Q9NS75 346 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF175Q9Y473 711 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 PCNX2A6NKB5 2137 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 IGKV3D-15A0A087WSY6 115 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 IFITM5A6NNB3 132 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF724A8MTY0 619 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 PRR32B1ATL7 298 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF814B7Z6K7 855 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 MAGEB3O15480 346 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 SULT1B1O43704 296 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 RAMP1O60894 148 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ITGB2P05107 769 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 IL7P13232 177 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 PRKXP51817 358 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ART1P52961 327 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 RPS11P62280 158 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS50-205ENST00000441602 INSL4Q14641 139 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 RAB35Q15286 201 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 STEAP3Q658P3 488 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF57Q68EA5 555 aaPredicted RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 DOK3Q7L591 496 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 SYT9Q86SS6 491 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF100Q8IYN0 542 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 Q8N402 240 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 SNIP1Q8TAD8 396 aaKnown RBP5.34□□□□□ -1.55
VPS50-205ENST00000441602 PBOV1Q9GZY1 135 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 SLCO5A1Q9H2Y9 848 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZCCHC4Q9H5U6 513 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 DIABLOQ9NR28 239 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 UPB1Q9UBR1 384 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 CAMK2AQ9UQM7 478 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 SLC22A13Q9Y226 551 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 V9GYH0 126 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 CACNA1HO95180 2353 aa5.34□□□□□ -1.55
VPS50-205ENST00000441602 ZNF587BE7ETH6 402 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 MTRF1O75570 445 aaKnown RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 UBL3O95164 117 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ZNF708P17019 499 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 AP3S2P59780 193 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ODF4Q2M2E3 257 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ELFN2Q5R3F8 820 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 HES5Q5TA89 166 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 FAM27BQ5VT28 67 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 CORO6Q6QEF8 472 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 OR6M1Q8NGM8 313 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 RGP1Q92546 391 aaPredicted RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 RFT1Q96AA3 541 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SARAFQ96BY9 339 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 CPNE2Q96FN4 548 aaPredicted RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 C7orf50Q9BRJ6 194 aaKnown RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 OR10A2Q9H208 303 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ZNF552Q9H707 407 aaPredicted RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 GLRX2Q9NS18 164 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 PLEK2Q9NYT0 353 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 MALT1Q9UDY8 824 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 STEAP1Q9UHE8 339 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 LHFPL6Q9Y693 200 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 IGKV1D-43A0A0B4J1Z2 117 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 A0A0G2JK05 382 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ZNF716A6NP11 495 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SCGNO76038 276 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 MAS1P04201 325 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 GSTT2BP0CG30 244 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SNRPBP14678 240 aaKnown RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 ATF1P18846 271 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 CX3CR1P49238 355 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SELENOPP49908 381 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 LHX2P50458 406 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 TNFSF10P50591 281 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 OR10A3P58181 314 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ASAH1Q13510 395 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 NRN1LQ496H8 165 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ATP1A1-AS1Q5TC04 95 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 TMEM53Q6P2H8 277 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 PGAP1Q75T13 922 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 PRSS35Q8N3Z0 413 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 OR5D14Q8NGL3 314 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 LGALS14Q8TCE9 139 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 NANOS1Q8WY41 292 aaKnown RBP5.33□□□□□ -1.56
VPS50-205ENST00000441602 HSD17B8Q92506 261 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 APH1AQ96BI3 265 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ZNF416Q9BWM5 594 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 HES7Q9BYE0 225 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SLC17A5Q9NRA2 495 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 TIMM10BQ9Y5J6 103 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SHISA3A0PJX4 238 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 P2RY10O00398 339 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 TM4SF5O14894 197 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 PIN1P1O15428 100 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SGCEO43556 437 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 ELK1P19419 428 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 CDAP32320 146 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 RFC3P40938 356 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 MAP2K3P46734 347 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 SLC6A9P48067 706 aa5.33□□□□□ -1.56
VPS50-205ENST00000441602 CLDN18P56856 261 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms