RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 KIF13BQ9NQT8 1826 aa2.19□□□□□ -2.06
VPS41-207ENST00000439468 CENPJQ9HC77 1338 aaPredicted RBP2.18□□□□□ -2.06
VPS41-207ENST00000439468 N4BP2Q86UW6 1770 aaPredicted RBP2.18□□□□□ -2.06
VPS41-207ENST00000439468 ZFYVE9O95405 1425 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 ADAMTS13Q76LX8 1427 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 H0YHG0 523 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 AIM2O14862 343 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 MRPS12O15235 138 aaKnown RBP2.18□□□□□ -2.06
VPS41-207ENST00000439468 FTH1P02794 183 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 FABP3P05413 133 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 PLEKP08567 350 aaPredicted RBP2.18□□□□□ -2.06
VPS41-207ENST00000439468 TROVE2P10155 538 aaKnown RBP eCLIP2.18□□□□□ -2.06
VPS41-207ENST00000439468 ZNF823P16415 610 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 CDKN2BP42772 138 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 MXD1Q05195 221 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 SELENBP1Q13228 472 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 PTGES3Q15185 160 aaKnown RBP2.18□□□□□ -2.06
VPS41-207ENST00000439468 RCN1Q15293 331 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 PTPN20Q4JDL3 420 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 COA6Q5JTJ3 125 aaKnown RBP2.18□□□□□ -2.06
VPS41-207ENST00000439468 CARD17Q5XLA6 110 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 C12orf56Q8IXR9 622 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 PRELID2Q8N945 189 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 OR7G2Q8NG99 324 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 CD300LFQ8TDQ1 290 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 PIK3IP1Q96FE7 263 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 BEX1Q9HBH7 125 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 SLC40A1Q9NP59 571 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 KLK12Q9UKR0 248 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 USP47Q96K76 1375 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 PLEKHH2Q8IVE3 1493 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 NRXN1Q9ULB1 1477 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 CCDC88AQ3V6T2 1871 aa2.18□□□□□ -2.06
VPS41-207ENST00000439468 MN1Q10571 1320 aaPredicted RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 TET2Q6N021 2002 aaPredicted RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 KMT2BQ9UMN6 2715 aaPredicted RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 SMCO3A2RU48 225 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 SGK1O00141 431 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 ANGPTL7O43827 346 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 ICOSLGO75144 302 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 SRP72O76094 671 aaKnown RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 ACSM4P0C7M7 580 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 SMIM10L1P0DMW3 83 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 CALM1P0DP23 149 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 CALM2P0DP24 149 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 CALM3P0DP25 149 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 ADRB3P13945 408 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 RPS9P46781 194 aaKnown RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 SSR4P51571 173 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 PRRX1P54821 245 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 LRRC63Q05C16 580 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 TWF1Q12792 350 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 RCAN2Q14206 197 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 DEFB116Q30KQ4 102 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 TMEM255AQ5JRV8 349 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 RAET1LQ5VY80 246 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 REEP3Q6NUK4 255 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 CCDC73Q6ZRK6 1079 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 TMEM179Q6ZVK1 233 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 TMEM135Q86UB9 458 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 CMTM1Q8IZ96 169 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 PIBF1Q8WXW3 757 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 SMIM10Q96HG1 83 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 FAM210BQ96KR6 192 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 BMFQ96LC9 184 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 SERPINB12Q96P63 405 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 PLIN2Q99541 437 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 SH3GL3Q99963 347 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 C20orf24Q9BUV8 137 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 ILKAPQ9H0C8 392 aaPredicted RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 IFI27L2Q9H2X8 130 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 TMEM185BQ9H7F4 350 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 NEK6Q9HC98 313 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 ZNF160Q9HCG1 818 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 RETNQ9HD89 108 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 CD84Q9UIB8 345 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 TBX21Q9UL17 535 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 GOLT1BQ9Y3E0 138 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 RPRD2Q5VT52 1461 aaKnown RBP2.17□□□□□ -2.06
VPS41-207ENST00000439468 USP54Q70EL1 1684 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 PAPPA2Q9BXP8 1791 aa2.17□□□□□ -2.06
VPS41-207ENST00000439468 RGPD8O14715 1765 aaPredicted RBP2.16□□□□□ -2.06
VPS41-207ENST00000439468 SCN11AQ9UI33 1791 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 COL4A4P53420 1690 aaPredicted RBP2.16□□□□□ -2.06
VPS41-207ENST00000439468 NHSQ6T4R5 1651 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 IGLV11-55A0A075B6I3 123 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 IGLV3-16A0A075B6K0 115 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 GLYATL1P3A0A0U1RQE8 302 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 CDC7O00311 574 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 DYNC1I1O14576 645 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 SNAI2O43623 268 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 DNAJB6O75190 326 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 HMMRO75330 724 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 ENTPD5O75356 428 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 WBP4O75554 376 aaKnown RBP2.16□□□□□ -2.06
VPS41-207ENST00000439468 GABARAPO95166 117 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 MAGP20916 626 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 DCKP27707 260 aa2.16□□□□□ -2.06
VPS41-207ENST00000439468 CEACAM6P40199 344 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms