RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TMEM123Q8N131 208 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 CLIP4Q8N3C7 705 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 TBC1D15Q8TC07 691 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 TPD52L3Q96J77 140 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 C7orf34Q96L11 122 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 OR2M2Q96R28 347 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 ZNF347Q96SE7 839 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 BCL2L14Q9BZR8 327 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 ARMC1Q9NVT9 282 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 ZNF224Q9NZL3 707 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 SH3GLB1Q9Y371 365 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 TANC2Q9HCD6 1990 aa9.35□□□□□ -0.91
CSTF3-203ENST00000438862 LOC102725191A0A1B0GVB3 256 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 NPIPB7O75200 414 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 IGHV1-46P01743 117 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 MELTFP08582 738 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 PNMTP11086 282 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 FCGR1AP12314 374 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 RHCEP18577 417 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 GTF2E2P29084 291 aaKnown RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 ACAA2P42765 397 aaKnown RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 UCP2P55851 309 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 RGS8P57771 180 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 SEC61A1P61619 476 aaKnown RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 COPZ1P61923 177 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 KPNB1Q14974 876 aaKnown RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 MFSD13AQ14CX5 517 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 PHYHD1Q5SRE7 291 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 WBP2NLQ6ICG8 309 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 RANBP3LQ86VV4 465 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 LRRC28Q86X40 367 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 C20orf196Q8IYI0 205 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 SLC30A7Q8NEW0 376 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 CANT1Q8WVQ1 401 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 SSMEM1Q8WWF3 244 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 SGCDQ92629 289 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 RSRC1Q96IZ7 334 aaKnown RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 C1orf198Q9H425 327 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 C16orf95Q9H693 158 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 C12orf10Q9HB07 376 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 CDH20Q9HBT6 801 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 RLIMQ9NVW2 624 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 AURKAIP1Q9NWT8 199 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-203ENST00000438862 B3GAT1Q9P2W7 334 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 LRCH1Q9Y2L9 728 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 ENPP4Q9Y6X5 453 aa9.34□□□□□ -0.91
CSTF3-203ENST00000438862 PLSCR5A0PG75 271 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 HTR3EA5X5Y0 456 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 FTCDNL1E5RQL4 147 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 F5H0A9 414 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-203ENST00000438862 SPRY3O43610 288 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ENTPD5O75356 428 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 KRT36O76013 467 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 AHSA1O95433 338 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 SNAP29O95721 258 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 PTHP01270 115 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 FABP3P05413 133 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ADH4P08319 380 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 B4GALT1P15291 398 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 FUT4P22083 530 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 LIPAP38571 399 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 SMIM11AP58511 58 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 PAX2Q02962 417 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 PMS2P3Q13401 168 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 C11orf87Q6NUJ2 197 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ZNF613Q6PF04 617 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 VTCN1Q7Z7D3 282 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 CYP4Z1Q86W10 505 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ZSCAN4Q8NAM6 433 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-203ENST00000438862 OR6T1Q8NGN1 323 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 OR1J2Q8NGS2 313 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 DNAJA4Q8WW22 397 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-203ENST00000438862 SLC25A36Q96CQ1 311 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 DCLRE1CQ96SD1 692 aaKnown RBP9.33□□□□□ -0.92
CSTF3-203ENST00000438862 FOXB1Q99853 325 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 CHID1Q9BWS9 393 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ANKRD19PQ9H560 264 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 TMEM27Q9HBJ8 222 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 CYSLTR2Q9NS75 346 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 NDUFAF4Q9P032 175 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ZDHHC8Q9ULC8 765 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 FAM32AQ9Y421 112 aaKnown RBP9.33□□□□□ -0.92
CSTF3-203ENST00000438862 AP4S1Q9Y587 144 aa9.33□□□□□ -0.92
CSTF3-203ENST00000438862 ANKRD65E5RJM6 399 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 XPNPEP2O43895 674 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 GPR137BO60478 399 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 OR5F1O95221 314 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 MMP15P51511 669 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 HMGA2P52926 109 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 ERVS71-1P61550 626 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 ST3GAL3Q11203 375 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 GPR157Q5UAW9 335 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 ULK3Q6PHR2 472 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 GDPGP1Q6ZNW5 385 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 HMGN2P46Q86SG4 172 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 LSRQ86X29 649 aaPredicted RBP9.32□□□□□ -0.92
CSTF3-203ENST00000438862 ZDHHC21Q8IVQ6 265 aa9.32□□□□□ -0.92
CSTF3-203ENST00000438862 CADM2Q8N3J6 435 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms