RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MSR1P21757 451 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 CTSSP25774 331 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 CA7P43166 264 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 RPL5P46777 297 aaKnown RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF84P51523 738 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 NR1H2P55055 460 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 PER3P56645 1201 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 LSM6P62312 80 aaKnown RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ACTC1P68032 377 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ACTA1P68133 377 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 MRPL49Q13405 166 aaKnown RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ENDOGQ14249 297 aaKnown RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 GALEQ14376 348 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 TBCEQ15813 527 aaPredicted RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 NEDD8Q15843 81 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 SGCAQ16586 387 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 MSMPQ1L6U9 139 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 FAM27BQ5VT28 67 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 C9orf135Q5VTT2 229 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 UBE2UQ5VVX9 321 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 CORO6Q6QEF8 472 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF322Q6U7Q0 402 aaPredicted RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF627Q7L945 461 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 LINC00346Q8IVM7 164 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 UBE2J2Q8N2K1 259 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 SLC22A24Q8N4F4 322 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 OR6N2Q8NGY6 317 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ST7LQ8TDW4 575 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 MUL1Q969V5 352 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 TMIGD2Q96BF3 282 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 FBXO17Q96EF6 278 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 COG8Q96MW5 612 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ZFP3Q96NJ6 502 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 BBC3Q96PG8 261 aaPredicted RBP6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 DMRTA2Q96SC8 542 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 MNTQ99583 582 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 FOXB1Q99853 325 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 SH3GL3Q99963 347 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 VKORC1Q9BQB6 163 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ABHD6Q9BV23 337 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ALG8Q9BVK2 526 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF416Q9BWM5 594 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 TTTY10Q9BZA0 68 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 NELFAQ9H3P2 528 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 SIAEQ9HAT2 523 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 UPB1Q9UBR1 384 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 MALT1Q9UDY8 824 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 Q9UFV3 132 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 CYB5R1Q9UHQ9 305 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 KCNG2Q9UJ96 466 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 SH3BGRL2Q9UJC5 107 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 OSGIN2Q9Y236 505 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 ERGIC3Q9Y282 383 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 MEMO1Q9Y316 297 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 LHFPL6Q9Y693 200 aa6.16□□□□□ -1.42
LSM3P3-201ENST00000436601 HSPB2A8KAH6 182 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF99A8MXY4 864 aaPredicted RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 E9PI62 339 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF670-ZNF695F2Z2N8 137 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 PSMD9O00233 223 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 RER1O15258 196 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 CNOT4O95628 575 aaKnown RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 LALBAP00709 142 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 PATE4P0C8F1 98 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 CD8BP10966 210 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 B4GALT1P15291 398 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 NPR2P20594 1047 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 IGHV1-2P23083 117 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 MPGP29372 298 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 GP2P55259 537 aaKnown RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 WNT4P56705 351 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 OR12D2P58182 307 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 HIST1H3AP68431 136 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 SRSF2Q01130 221 aaKnown RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 ROM1Q03395 351 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 EIF2B1Q14232 305 aaKnown RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 SPHARQ15513 63 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 MED22Q15528 200 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 HSPB2Q16082 182 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 EIF2S3LQ2VIR3 472 aaKnown RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 NRN1LQ496H8 165 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 CDONQ4KMG0 1287 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 TP53I3Q53FA7 332 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 SYT6Q5T7P8 510 aaPredicted RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 HIST2H3PS2Q5TEC6 136 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 SLC18B1Q6NT16 456 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF474Q6S9Z5 364 aaPredicted RBP6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 KLHL24Q6TFL4 600 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 ZNF813Q6ZN06 617 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 CFAP77Q6ZQR2 320 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 Q6ZT83 130 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 HIST2H3AQ71DI3 136 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 DCXRQ7Z4W1 244 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 LIX1LQ8IVB5 337 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 SKA3Q8IX90 412 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 GABRG1Q8N1C3 465 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 LRRC18Q8N456 261 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 OR10H5Q8NGA6 315 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 OR10S1Q8NGN2 331 aa6.15□□□□□ -1.42
LSM3P3-201ENST00000436601 OR52N1Q8NH53 320 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms