RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ACTL6AO96019 429 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ALDOBP05062 364 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 SMIM10L1P0DMW3 83 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 GZMAP12544 262 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 SERPINB5P36952 375 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 NAMPTP43490 491 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 RGS8P57771 180 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 TIMM10P62072 90 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 PAX5Q02548 391 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 LIPEQ05469 1076 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 REG3AQ06141 175 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CKAP4Q07065 602 aaKnown RBP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 MERTKQ12866 999 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 AQP6Q13520 282 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ITIH4Q14624 930 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 GUCA2BQ16661 112 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 C9orf135Q5VTT2 229 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 REEP3Q6NUK4 255 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CNIH2Q6PI25 160 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF621Q6ZSS3 439 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC16A14Q7RTX9 510 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 STPG2Q8N412 459 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 FAM71E2Q8N5Q1 922 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR4A4PQ8NGN8 299 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ELSPBP1Q96BH3 223 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CCDC126Q96EE4 140 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 MED8Q96G25 268 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 SMIM10Q96HG1 83 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 WFIKKN1Q96NZ8 548 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC29A1Q99808 456 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 BPIFA3Q9BQP9 254 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 OSBPL10Q9BXB5 764 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 DNTTIP1Q9H147 329 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 NTN4Q9HB63 628 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 PDFQ9HBH1 243 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CRLF2Q9HC73 371 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 DMAP1Q9NPF5 467 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CTPS2Q9NRF8 586 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 DDX18Q9NVP1 670 aaKnown RBP2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF225Q9UK10 706 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 ING4Q9UNL4 249 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 TRAPPC4Q9Y296 219 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CHD8Q9HCK8 2581 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 MROH7Q68CQ1 1323 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 TTC41PQ6P2S7 1318 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 CACNA1GO43497 2377 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 MED23Q9ULK4 1368 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 PKD1L2Q7Z442 2459 aa2.08□□□□□ -2.08
HMGB1P27-201ENST00000431429 PRUNE2Q8WUY3 3088 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 KCNE1BA0A087WTH5 132 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 A0A0B4J2A0 478 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 PLAC8L1A1L4L8 177 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 SMCO3A2RU48 225 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 AQP8O94778 261 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ANXA5P08758 320 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 CSF3P09919 207 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 CD1EP15812 388 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF24P17028 368 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 OMGP23515 440 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 AK4P27144 223 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 DCKP27707 260 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 RRM2P31350 389 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 HRH1P35367 487 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 GPX4P36969 197 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC1A1P43005 524 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 RPS5P46782 204 aaKnown RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 NOVP48745 357 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 CSNK1EP49674 416 aaKnown RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 RORCP51449 518 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 SH3BGRP55822 239 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 YWHAGP61981 247 aaKnown RBP eCLIP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 RPS21P63220 83 aaKnown RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ADARB1P78563 741 aaKnown RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC25A11Q02978 314 aaKnown RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ILKQ13418 452 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 IL18Q14116 193 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 PSG5Q15238 335 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF726P1Q15940 193 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 PAGE3Q5JUK9 113 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 LCN12Q6JVE5 192 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ANKRD26P1Q6NSI1 321 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 TMEM53Q6P2H8 277 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 DUX4L9Q6RFH8 374 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 CCDC73Q6ZRK6 1079 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 SSX9Q7RTT3 188 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 LUZP2Q86TE4 346 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 GABRG1Q8N1C3 465 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 LIX1Q8N485 282 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR6X1Q8NH79 312 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 FAM81AQ8TBF8 368 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 FANK1Q8TC84 345 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 MARCH1Q8TCQ1 289 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 AGR3Q8TD06 166 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 BLOC1S5Q8TDH9 187 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 ACER1Q8TDN7 264 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 RDH5Q92781 318 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 PIK3IP1Q96FE7 263 aa2.07□□□□□ -2.08
HMGB1P27-201ENST00000431429 RNF185Q96GF1 192 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms