RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 DEFB108BQ8NET1 73 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 OR2Z1Q8NG97 314 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 FAM216AQ8WUB2 273 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 C7orf34Q96L11 122 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 TSSK2Q96PF2 358 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 FUZQ9BT04 418 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 VSX1Q9NZR4 365 aaPredicted RBP13.08□□□□□ -0.32
SEC13-210ENST00000428626 NDUFAF4Q9P032 175 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 ASH2LQ9UBL3 628 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 EGFL7Q9UHF1 273 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 AP3M1Q9Y2T2 418 aa13.08□□□□□ -0.32
SEC13-210ENST00000428626 A0A1W2PRQ8 180 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 SOCS2O14508 198 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 RER1O15258 196 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 CDKN2AP42771 156 aaKnown RBP13.07□□□□□ -0.32
SEC13-210ENST00000428626 ACTG1P63261 375 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 SLC3A1Q07837 685 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 AQP6Q13520 282 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 DGCR6Q14129 220 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 HLXQ14774 488 aaPredicted RBP13.07□□□□□ -0.32
SEC13-210ENST00000428626 ZMYND11Q15326 602 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 MEP1BQ16820 701 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 NANPQ8TBE9 248 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 SAMD8Q96LT4 415 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 DIRC2Q96SL1 478 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 GPX7Q96SL4 187 aaPredicted RBP13.07□□□□□ -0.32
SEC13-210ENST00000428626 HOPXQ9BPY8 73 aaPredicted RBP13.07□□□□□ -0.32
SEC13-210ENST00000428626 WACQ9BTA9 647 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 NUAK2Q9H093 628 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 ANKRD19PQ9H560 264 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 RERGLQ9H628 205 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 PLEK2Q9NYT0 353 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 ABCD2Q9UBJ2 740 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 IER3IP1Q9Y5U9 82 aa13.07□□□□□ -0.32
SEC13-210ENST00000428626 XKRYO14609 159 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 AHCYL1O43865 530 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 NDUFB2O95178 105 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
SEC13-210ENST00000428626 GSTM3P21266 225 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 SDHAP31040 664 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 NUDT2P50583 147 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 SCGB2A2Q13296 93 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 RSPO1Q2MKA7 263 aaPredicted RBP13.06□□□□□ -0.32
SEC13-210ENST00000428626 ZMAT1Q5H9K5 638 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
SEC13-210ENST00000428626 ARL9Q6T311 187 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 HACD2Q6Y1H2 254 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 OR5AS1Q8N127 324 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 OR1F12Q8NHA8 337 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
SEC13-210ENST00000428626 KCTD14Q9BQ13 255 aaPredicted RBP13.06□□□□□ -0.32
SEC13-210ENST00000428626 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
SEC13-210ENST00000428626 TMEM5Q9Y2B1 443 aa13.06□□□□□ -0.32
SEC13-210ENST00000428626 PPIAL4EA0A075B759 164 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 PPIAL4CA0A0B4J2A2 164 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 F5H0A9 414 aaPredicted RBP13.05□□□□□ -0.32
SEC13-210ENST00000428626 PPIAL4DF5H284 164 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 H0YL77 283 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 TRIM77I1YAP6 450 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 KHDRBS3O75525 346 aaKnown RBP13.05□□□□□ -0.32
SEC13-210ENST00000428626 TXNDC12O95881 172 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 PPIAL4FP0DN26 164 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 GATA3P23771 443 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 PSME3P61289 254 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 LSM6P62312 80 aaKnown RBP13.05□□□□□ -0.32
SEC13-210ENST00000428626 HIST1H3AP68431 136 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 FGD3Q5JSP0 725 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 HIST2H3PS2Q5TEC6 136 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 GPR139Q6DWJ6 353 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 HIST2H3AQ71DI3 136 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 RRM2BQ7LG56 351 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 LRRC28Q86X40 367 aaPredicted RBP13.05□□□□□ -0.32
SEC13-210ENST00000428626 GLB1L2Q8IW92 636 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 DHRS1Q96LJ7 313 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 C1QTNF5Q9BXJ0 243 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 MYLK2Q9H1R3 596 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 EFCAB1Q9HAE3 211 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 POLR3KQ9Y2Y1 108 aaPredicted RBP13.05□□□□□ -0.32
SEC13-210ENST00000428626 LHFPL6Q9Y693 200 aa13.05□□□□□ -0.32
SEC13-210ENST00000428626 IGLV1-36A0A0B4J1U3 117 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 FOXH1O75593 365 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 ZNF205O95201 554 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 EGR1P18146 543 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 RHCEP18577 417 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 TUBG1P23258 451 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 MDH1P40925 334 aaKnown RBP13.04□□□□□ -0.32
SEC13-210ENST00000428626 SLC6A9P48067 706 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 MMP16P51512 607 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 PRSS12P56730 875 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 BTG1P62324 171 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 KCNMB1Q16558 191 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 TMEM155Q4W5P6 130 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 GLYATQ6IB77 296 aa13.04□□□□□ -0.32
SEC13-210ENST00000428626 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms