RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LSM11P83369 360 aaKnown RBP eCLIP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 POU4F2Q12837 409 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FAM76BQ5HYJ3 339 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FAM27D1Q5T7N8 215 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 KCTD9Q7L273 389 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 MRGPRGQ86SM5 289 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SLC35F2Q8IXU6 374 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 INTS14Q96SY0 518 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM43Q9BTV4 400 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 UFSP2Q9NUQ7 469 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ERRFI1Q9UJM3 462 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 TRAPPC4Q9Y296 219 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ADAM18Q9Y3Q7 739 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 PCYT1BQ9Y5K3 369 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 WNK2Q9Y3S1 2297 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SPTBN4Q9H254 2564 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ACOD1A6NK06 481 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SYT5O00445 386 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FFAR1O14842 300 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FGF5P12034 268 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF44P15621 663 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 NFYAP23511 347 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 FPR3P25089 353 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 CLDN20P56880 219 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 OR8B8Q15620 311 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 STX12Q86Y82 276 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 OR5AS1Q8N127 324 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 PRR18Q8N4B5 295 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM99Q8N816 258 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 ALKBH3Q96Q83 286 aaPredicted RBP9.62□□□□□ -0.87
TCOF1-204ENST00000427724 MICU1Q9BPX6 476 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SLX1AQ9BQ83 275 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 SYT4Q9H2B2 425 aa9.62□□□□□ -0.87
TCOF1-204ENST00000427724 CDHR4A6H8M9 788 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 MAGEB4O15481 346 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-204ENST00000427724 EFSO43281 561 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 SSX5O60225 188 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 CNR1P21554 472 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 CD96P40200 585 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 HMGA2P52926 109 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ZFP82Q8N141 532 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 FDCSPQ8NFU4 85 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 PFN4Q8NHR9 129 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ABHD4Q8TB40 342 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ZG16BQ96DA0 208 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ATG5Q9H1Y0 275 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 C12orf10Q9HB07 376 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 PARD6AQ9NPB6 346 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ARRDC5A6NEK1 342 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 OR6C65A6NJZ3 312 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 UCHL1P09936 223 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 PTH2RP49190 550 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 AKR1C2P52895 323 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 PCBP3P57721 371 aaKnown RBP9.61□□□□□ -0.87
TCOF1-204ENST00000427724 AKR1C1Q04828 323 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 TBC1D28Q2M2D7 210 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 C12orf73Q69YU5 71 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ANKRD16Q6P6B7 361 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 LINC00346Q8IVM7 164 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 OR56B4Q8NH76 319 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 CCDC107Q8WV48 283 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 UPRTQ96BW1 309 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 FBXL2Q9UKC9 423 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 WASF3Q9UPY6 502 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 TP53TG5Q9Y2B4 290 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF236Q9UL36 1845 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ACTL6BO94805 426 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 SP1P08047 785 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 ACSM4P0C7M7 580 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 CBR1P16152 277 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 PRKAR1BP31321 381 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 RPS23P62266 143 aaKnown RBP9.61□□□□□ -0.87
TCOF1-204ENST00000427724 FOXK2Q01167 660 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 MZT1Q08AG7 82 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 TPBGQ13641 420 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 MPEG1Q2M385 716 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 FBXL14Q8N1E6 418 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 FNDC9Q8TBE3 224 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 M1APQ8TC57 530 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 NMNAT3Q96T66 252 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 SEC22CQ9BRL7 303 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 MED29Q9NX70 200 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 CHST2Q9Y4C5 530 aa9.61□□□□□ -0.87
TCOF1-204ENST00000427724 CCDC168Q8NDH2 2452 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 CSPG4Q6UVK1 2322 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 MEIS3P1A6NDR6 274 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 FKBP2P26885 142 aaKnown RBP9.6□□□□□ -0.87
TCOF1-204ENST00000427724 EVX1P49640 407 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 LGALS4P56470 323 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 PLGLAQ15195 96 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 RSU1Q15404 277 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 PRTGQ2VWP7 1150 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 KRBOX4Q5JUW0 171 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM88Q6PEY1 159 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 KIRREL2Q6UWL6 708 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
TCOF1-204ENST00000427724 FAM57BQ71RH2 274 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms