RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 NUDT6P53370 316 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 NAAAQ02083 359 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 SPOCK1Q08629 439 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 SMN1Q16637 294 aaKnown RBP14.74□□□□□ -0.05
COL7A1-202ENST00000422991 ELFN2Q5R3F8 820 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 DCXRQ7Z4W1 244 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 CDC20BQ86Y33 519 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 ALDH16A1Q8IZ83 802 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF454Q8N9F8 522 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 SLC30A7Q8NEW0 376 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 OR51G2Q8NGK0 314 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 OR10S1Q8NGN2 331 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 OTOSQ8NHW6 89 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 ST7LQ8TDW4 575 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 HS3ST6Q96QI5 342 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 HDHD2Q9H0R4 259 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 PNRC2Q9NPJ4 139 aaKnown RBP14.74□□□□□ -0.05
COL7A1-202ENST00000422991 FBN2P35556 2912 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 HEATR1Q9H583 2144 aaKnown RBP14.74□□□□□ -0.05
COL7A1-202ENST00000422991 PLCE1Q9P212 2302 aa14.74□□□□□ -0.05
COL7A1-202ENST00000422991 IGHV2OR16-5A0A0B4J2B6 119 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 FAM221AA4D161 298 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 ABCD4O14678 606 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 CD3EP07766 207 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 SBK2P0C263 348 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 DBTP11182 482 aaKnown RBP14.73□□□□□ -0.05
COL7A1-202ENST00000422991 STOMP27105 288 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 CALCRP30988 508 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 HTR5AP47898 357 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 CDK5R2Q13319 367 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 EIF2B1Q14232 305 aaKnown RBP14.73□□□□□ -0.05
COL7A1-202ENST00000422991 TMEM154Q6P9G4 183 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF295-AS1Q8N0V1 137 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 OR1F12Q8NHA8 337 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 SMAP2Q8WU79 429 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-202ENST00000422991 RNFT2Q96EX2 444 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 POM121L2Q96KW2 1035 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 TMEM204Q9BSN7 226 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 DDX28Q9NUL7 540 aaKnown RBP14.73□□□□□ -0.05
COL7A1-202ENST00000422991 KLHDC2Q9Y2U9 406 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 RNF115Q9Y4L5 304 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 ABCA12Q86UK0 2595 aa14.73□□□□□ -0.05
COL7A1-202ENST00000422991 LOC100509620A0A075B734 347 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 APOL3O95236 402 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 CRYAAP02489 173 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF35P13682 527 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 APLNRP35414 380 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 HCCSP53701 268 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 TBC1D28Q2M2D7 210 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 LAIR2Q6ISS4 152 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 SLC35F2Q8IXU6 374 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 PAQR4Q8N4S7 273 aaPredicted RBP14.72□□□□□ -0.05
COL7A1-202ENST00000422991 IL17RDQ8NFM7 739 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 OR4F15Q8NGB8 312 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 SLAMF6Q96DU3 332 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 C14orf79Q96F83 325 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 AMELYQ99218 206 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 MNTQ99583 582 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 COQ7Q99807 217 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 ATF6BQ99941 703 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 ABHD6Q9BV23 337 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 AMBNQ9NP70 447 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 COPS3Q9UNS2 423 aa14.72□□□□□ -0.05
COL7A1-202ENST00000422991 RPL36Q9Y3U8 105 aaKnown RBP14.72□□□□□ -0.05
COL7A1-202ENST00000422991 APCP25054 2843 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 SHISA9B4DS77 424 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 ZNF878C9JN71 531 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 ATP6V1G2-DDX39BF2Z307 99 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 CTAG2O75638 210 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 LYNP07948 512 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 CCL2P13500 99 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 ALOX5APP20292 161 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 GDI2P50395 445 aaKnown RBP14.71□□□□□ -0.05
COL7A1-202ENST00000422991 ECH1Q13011 328 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 KRTAP27-1Q3LI81 207 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 ADAM5Q6NVV9 412 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-202ENST00000422991 RFLNBQ8N5W9 214 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 KBTBD8Q8NFY9 601 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 OR1J2Q8NGS2 313 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 RNF133Q8WVZ7 376 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 SLC7A6Q92536 515 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 LGALS12Q96DT0 336 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 KCNS3Q9BQ31 491 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 CDH20Q9HBT6 801 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 MRPS18AQ9NVS2 196 aaKnown RBP14.71□□□□□ -0.05
COL7A1-202ENST00000422991 LAMP5Q9UJQ1 280 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 TMEM14AQ9Y6G1 99 aa14.71□□□□□ -0.05
COL7A1-202ENST00000422991 RTTNQ86VV8 2226 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 ROS1P08922 2347 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 A0A1W2PPR1 153 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 C5orf49A4QMS7 147 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 J3QRE1 110 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 PLAUP00749 431 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 ATP6V1E1P36543 226 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 SLC15A1P46059 708 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF704Q6ZNC4 412 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-202ENST00000422991 THEM6Q8WUY1 208 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 RADILQ96JH8 1075 aa14.7□□□□□ -0.06
COL7A1-202ENST00000422991 CNBD2Q96M20 576 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms