RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 ADH5P11766 374 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 NQO2P16083 231 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 FSTP19883 344 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 DVL1P1P54792 670 aaPredicted RBP9.62□□□□□ -0.87
USP54-204ENST00000422491 EIF2B1Q14232 305 aaKnown RBP9.62□□□□□ -0.87
USP54-204ENST00000422491 ZNF74Q16587 644 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 ZNF260Q3ZCT1 412 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 FAM76BQ5HYJ3 339 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OR2B11Q5JQS5 317 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 TEX30Q5JUR7 227 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 EEF1A1P5Q5VTE0 462 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 LHX8Q68G74 356 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 PRSS54Q6PEW0 395 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 PRSS41Q7RTY9 318 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 ETFBKMTQ8IXQ9 262 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OTOSQ8NHW6 89 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 LIPHQ8WWY8 451 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 TRIM43Q96BQ3 446 aaPredicted RBP9.62□□□□□ -0.87
USP54-204ENST00000422491 OR8B4Q96RC9 309 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 SPSB2Q99619 263 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OCSTAMPQ9BR26 566 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 HDAC8Q9BY41 377 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 ELOVL3Q9HB03 270 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 LYRM4Q9HD34 91 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OR2S2Q9NQN1 319 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 DHDHQ9UQ10 334 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 MRPS2Q9Y399 296 aaKnown RBP9.62□□□□□ -0.87
USP54-204ENST00000422491 CYR61O00622 381 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 AGPAT2O15120 278 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 CTSVO60911 334 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 MED6O75586 246 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 GRK6P43250 576 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 GPR18Q14330 331 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 SLC17A1Q14916 467 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 MEP1BQ16820 701 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 TRAPPC6BQ86SZ2 158 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 SFTPA1Q8IWL2 248 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 WDSUB1Q8N9V3 476 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 ACBD4Q8NC06 268 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 ZNF563Q8TA94 476 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 TSPAN32Q96QS1 320 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 LMF2Q9BU23 707 aaKnown RBP9.61□□□□□ -0.87
USP54-204ENST00000422491 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 ZBP1Q9H171 429 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 TMPRSS5Q9H3S3 457 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 PILRAQ9UKJ1 303 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 KPTNQ9Y664 436 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 POMT1Q9Y6A1 747 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 USP34Q70CQ2 3546 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 AP4M1O00189 453 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 RAB27BO00194 218 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 NUDT21O43809 227 aaKnown RBP9.61□□□□□ -0.87
USP54-204ENST00000422491 RAB5AP20339 215 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 NME2P22392 152 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 HRH1P35367 487 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 HTR5AP47898 357 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 ADPRHP54922 357 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 SSTP61278 116 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 LILRB2Q8N423 598 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 PTX4Q96A99 478 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 RAB7BQ96AH8 199 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 HHIPL1Q96JK4 782 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 LRRC3BQ96PB8 259 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 NOTCH4Q99466 2003 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 GGACTQ9BVM4 153 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 KIR3DX1Q9H7L2 352 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 CKLFQ9UBR5 152 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 RHBDD3Q9Y3P4 386 aa9.61□□□□□ -0.87
USP54-204ENST00000422491 FANCMQ8IYD8 2048 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 A0A1W2PPH5 198 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 SERPINA5P05154 406 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 ASAH2BP0C7U1 165 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 GLP1RP43220 463 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 SULT1A2P50226 295 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 PGDP52209 483 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 MFGE8Q08431 387 aaPredicted RBP9.6□□□□□ -0.87
USP54-204ENST00000422491 EMC4Q5J8M3 183 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 OTPQ5XKR4 325 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 TMEM184AQ6ZMB5 413 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 RNF44Q7L0R7 432 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 LYPD6Q86Y78 171 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 KDF1Q8NAX2 398 aaPredicted RBP9.6□□□□□ -0.87
USP54-204ENST00000422491 OR5T3Q8NGG3 340 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 SECTM1Q8WVN6 248 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 MALSU1Q96EH3 234 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 IP6K3Q96PC2 410 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 KXD1Q9BQD3 176 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 PDE7BQ9NP56 450 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 PARP11Q9NR21 331 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 GRHPRQ9UBQ7 328 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 hCG_1809904A0A1W2PP81 198 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 LOC390937A0A1W2PQ73 354 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 A0A1W2PR64 198 aa9.6□□□□□ -0.87
USP54-204ENST00000422491 A0A1W2PRV1 198 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms