RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 IL7P13232 177 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 MYL9P24844 172 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 AZGP1P25311 298 aaKnown RBP18.51■□□□□ 0.55
GPC1-202ENST00000420138 PLA2G5P39877 138 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 C3AR1Q16581 482 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 METAP1DQ6UB28 335 aaPredicted RBP18.51■□□□□ 0.55
GPC1-202ENST00000420138 SYT9Q86SS6 491 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 OR51A4Q8NGJ6 313 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 PNPLA2Q96AD5 504 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 PNRC2Q9NPJ4 139 aaKnown RBP18.51■□□□□ 0.55
GPC1-202ENST00000420138 ASH2LQ9UBL3 628 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 TBC1D24Q9ULP9 559 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 R4GMQ9 66 aa18.51■□□□□ 0.55
GPC1-202ENST00000420138 TRAV17A0A0B4J275 112 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 HPGDSO60760 199 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 LSM6P62312 80 aaKnown RBP18.5■□□□□ 0.55
GPC1-202ENST00000420138 Q499Y3 187 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 CCBE1Q6UXH8 406 aaPredicted RBP18.5■□□□□ 0.55
GPC1-202ENST00000420138 LINGO2Q7L985 606 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 AAED1Q7RTV5 226 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 TMEM45BQ96B21 275 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 ULBP2Q9BZM5 246 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 G6PC2Q9NQR9 355 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 CENPMQ9NSP4 180 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 ADAM30Q9UKF2 790 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 ACACAQ13085 2346 aa18.5■□□□□ 0.55
GPC1-202ENST00000420138 CEP295Q9C0D2 2601 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 TRGV5A0A0B4J1U4 118 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 SLC43A1O75387 559 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 PTBP1P26599 531 aaKnown RBP eCLIP18.49■□□□□ 0.55
GPC1-202ENST00000420138 THBS2P35442 1172 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 SCN1BQ07699 218 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 ENDOGQ14249 297 aaKnown RBP18.49■□□□□ 0.55
GPC1-202ENST00000420138 HSD17B12Q53GQ0 312 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 ZNF676Q8N7Q3 588 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 WDYHV1Q96HA8 205 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 SOSTQ9BQB4 213 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 ZNF416Q9BWM5 594 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 NELFAQ9H3P2 528 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 ZCCHC4Q9H5U6 513 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 GPR171O14626 319 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 RER1O15258 196 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 WISP2O76076 250 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 H2BFMP0C1H6 154 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 CPN1P15169 458 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 MSR1P21757 451 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 EVX1P49640 407 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 ODF4Q2M2E3 257 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 CNIH2Q6PI25 160 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 FNDC9Q8TBE3 224 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 KCTD12Q96CX2 325 aaKnown RBP18.49■□□□□ 0.55
GPC1-202ENST00000420138 RBM24Q9BX46 236 aaKnown RBP18.49■□□□□ 0.55
GPC1-202ENST00000420138 COMMD4Q9H0A8 199 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 B3GAT2Q9NPZ5 323 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 PAQR5Q9NXK6 330 aaPredicted RBP18.49■□□□□ 0.55
GPC1-202ENST00000420138 EMC9Q9Y3B6 208 aa18.49■□□□□ 0.55
GPC1-202ENST00000420138 TRBV5-7A0A0A0MS05 114 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 SLC19A2O60779 497 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 SRMP19623 302 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 DCTDP32321 178 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 MMP16P51512 607 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 SGCAQ16586 387 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 SLC25A35Q3KQZ1 300 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 PYDC2Q56P42 97 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 IDNKQ5T6J7 187 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 SFXN4Q6P4A7 337 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 RHOUQ7L0Q8 258 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 GFI1Q99684 422 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 FAM206AQ9NX38 181 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 POLR1DQ9Y2S0 133 aa18.48■□□□□ 0.55
GPC1-202ENST00000420138 IGHG3P01860 377 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 RAB3BP20337 219 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 SOX2P48431 317 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 IGFL3Q6UXB1 125 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 OR2AJ1Q8NGZ0 328 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 GPR148Q8TDV2 347 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 LDAHQ9H6V9 325 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 CRLF2Q9HC73 371 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 LAMA5O15230 3695 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 DMXL2Q8TDJ6 3036 aa18.47■□□□□ 0.55
GPC1-202ENST00000420138 URB1O60287 2271 aaKnown RBP18.47■□□□□ 0.55
GPC1-202ENST00000420138 A0A1W2PQ09 198 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 SYNGR4O95473 234 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 CSF3P09919 207 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 ZNF24P17028 368 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 MRPS34P82930 218 aaKnown RBP18.46■□□□□ 0.55
GPC1-202ENST00000420138 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.46■□□□□ 0.55
GPC1-202ENST00000420138 ITPKCQ96DU7 683 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 OR52A1Q9UKL2 312 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 MCTS1Q9ULC4 181 aaKnown RBP18.46■□□□□ 0.55
GPC1-202ENST00000420138 TMEM269A0A1B0GVZ9 245 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 ZNF878C9JN71 531 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 H3BSH0 61 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 HIST1H3AP68431 136 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 RIPPLY2Q5TAB7 128 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 HIST2H3PS2Q5TEC6 136 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 HIST2H3AQ71DI3 136 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.46■□□□□ 0.55
GPC1-202ENST00000420138 CPT1CQ8TCG5 803 aa18.46■□□□□ 0.55
GPC1-202ENST00000420138 ALKBH3Q96Q83 286 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms