RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ELMOD3Q96FG2 381 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 C19orf24Q9BVV8 132 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 OR52D1Q9H346 318 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 ZNF665Q9H7R5 613 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 MSL2Q9HCI7 577 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 DECR2Q9NUI1 292 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 ASH2LQ9UBL3 628 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 CGGBP1Q9UFW8 167 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-206ENST00000420121 MAGEL2Q9UJ55 1249 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 STARD10Q9Y365 291 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 LHFPL6Q9Y693 200 aa9.35□□□□□ -0.91
SSBP3-206ENST00000420121 CLDN25C9JDP6 229 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 RER1O15258 196 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 GADD45GO95257 159 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 ABHD16AO95870 558 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 MT-ND5P03915 603 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 DBHP09172 617 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 KITLGP21583 273 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 FPR3P25089 353 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 LIPAP38571 399 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 GSSP48637 474 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 TEKQ02763 1124 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 MEP1BQ16820 701 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 RSPO1Q2MKA7 263 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-206ENST00000420121 HFEQ30201 348 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 RFX4Q33E94 735 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 MTX3Q5HYI7 312 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 SAMD4BQ5PRF9 694 aaKnown RBP9.34□□□□□ -0.91
SSBP3-206ENST00000420121 UNQ6126/PRO20091Q6UXV3 157 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 CPLX4Q7Z7G2 160 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 RFLNBQ8N5W9 214 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 NPEPL1Q8NDH3 523 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 OR51F2Q8NH61 342 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 LRRC37BQ96QE4 947 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 CDRT15Q96T59 188 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 NSRP1Q9H0G5 558 aaKnown RBP9.34□□□□□ -0.91
SSBP3-206ENST00000420121 CYSLTR2Q9NS75 346 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 PLEK2Q9NYT0 353 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 TAGLN3Q9UI15 199 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 ATPIF1Q9UII2 106 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 PURGQ9UJV8 347 aaKnown RBP9.34□□□□□ -0.91
SSBP3-206ENST00000420121 AURKCQ9UQB9 309 aa9.34□□□□□ -0.91
SSBP3-206ENST00000420121 TRAV20A0A0B4J274 112 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 PLSCR5A0PG75 271 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 ARPC3O15145 178 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 TPD52L2O43399 206 aaKnown RBP9.33□□□□□ -0.92
SSBP3-206ENST00000420121 PLPP2O43688 288 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 HIST1H1CP16403 213 aaKnown RBP9.33□□□□□ -0.92
SSBP3-206ENST00000420121 ITGA2P17301 1181 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 PCMT1P22061 227 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 RRM2P31350 389 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 RPS6KA3P51812 740 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 ARHGDIAP52565 204 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 GNGT1P63211 74 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 SPIBQ01892 262 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 KRTAP27-1Q3LI81 207 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 C1orf94Q6P1W5 598 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 OR6V1Q8N148 313 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 SLC26A10Q8NG04 563 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 OR1F12Q8NHA8 337 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 FANK1Q8TC84 345 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 CCL17Q92583 94 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 HAVCR1Q96D42 359 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 CMBLQ96DG6 245 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 SAMD8Q96LT4 415 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 NSMCE2Q96MF7 247 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 ERMAPQ96PL5 475 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-206ENST00000420121 SIGLEC11Q96RL6 698 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 DIRC2Q96SL1 478 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 NMNAT3Q96T66 252 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 TMPRSS13Q9BYE2 586 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 NDEL1Q9GZM8 345 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 RERGLQ9H628 205 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 IL1RAPQ9NPH3 570 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 ZDHHC8Q9ULC8 765 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 B9D1Q9UPM9 204 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 ARL2BPQ9Y2Y0 163 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 GRIP1Q9Y3R0 1128 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 DOCK11Q5JSL3 2073 aa9.33□□□□□ -0.92
SSBP3-206ENST00000420121 OR6C68A6NDL8 312 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 TIMM8AO60220 97 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-206ENST00000420121 PNPP00491 289 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 IGHV2-70P01814 119 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 FABP3P05413 133 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 GSTM3P21266 225 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 ATP6V1B2P21281 511 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 TUBG1P23258 451 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 SLC6A6P31641 620 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 SRP14P37108 136 aaKnown RBP9.32□□□□□ -0.92
SSBP3-206ENST00000420121 HMGA2P52926 109 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 SMIM11AP58511 58 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 TNFAIP6P98066 277 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-206ENST00000420121 COX10Q12887 443 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 KRT72Q14CN4 511 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 ACSM5Q6NUN0 579 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 PGBD2Q6P3X8 592 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 LEG1Q6P5S2 330 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 CORO6Q6QEF8 472 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 ARL9Q6T311 187 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 FBXW12Q6X9E4 464 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms