RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TMEM235A6NFC5 223 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ELOA3DA6NLF2 546 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 PAX1P15863 534 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 GPR1P46091 355 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC26A5P58743 744 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RAB1AP62820 205 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RASGEF1BQ0VAM2 473 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ODF4Q2M2E3 257 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ELOA3BQ3SY89 546 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ACTBL2Q562R1 376 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TMEM268Q5VZI3 342 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 UBAC2Q8NBM4 344 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ELOA3Q8NG57 546 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 OR10D4PQ8NGN7 298 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RNF128Q8TEB7 428 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 LCN9Q8WX39 176 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 MISP3Q96FF7 219 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 PTCHD1Q96NR3 888 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 IL21Q9HBE4 155 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ZDHHC4Q9NPG8 344 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 PLA2G2EQ9NZK7 142 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 DNAJB11Q9UBS4 358 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 IKZF2Q9UKS7 526 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF346Q9UL40 294 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 HDGFL3Q9Y3E1 203 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 FLVCR1Q9Y5Y0 555 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 WDFY3Q8IZQ1 3526 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SCN3AQ9NY46 2000 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SEC14L6B5MCN3 397 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ASGR1P07306 291 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TSFMP43897 325 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 VASPP50552 380 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 NDUFA6P56556 154 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 HSD11B2P80365 405 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RSU1Q15404 277 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SURF2Q15527 256 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ASPHD2Q6ICH7 369 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 LINC00114Q6XXX2 140 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 CDC20BQ86Y33 519 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 COMMD1Q8N668 190 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 CCDC54Q8NEL0 328 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 OR2A1Q8NGT9 310 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 GPBAR1Q8TDU6 330 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TSEN15Q8WW01 171 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 HHIPL1Q96JK4 782 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ASB16Q96NS5 453 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 NKX3-1Q99801 234 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 PDE7BQ9NP56 450 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RNF186Q9NXI6 227 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 IL36AQ9UHA7 158 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 GDF2Q9UK05 429 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 F10P00742 488 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 HTR2CP28335 458 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 CCKBRP32239 447 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SNCAP37840 140 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 LSM6P62312 80 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 NTHL1P78549 312 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 DHCR24Q15392 516 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 MOGAT2Q3SYC2 334 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 LEG1Q6P5S2 330 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 AMZ2Q86W34 360 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 MAFIPQ8WZ33 124 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 C4orf45Q96LM5 186 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TGIF2Q9GZN2 237 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 CUTCQ9NTM9 273 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 PISDQ9UG56 409 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RPL36A-HNRNPH2H7BZ11 118 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 H7C1Q1 480 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 LEFTY2O00292 366 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TCAPO15273 167 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ADRB3P13945 408 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 KIR3DL2P43630 455 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC25A1P53007 311 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 UCP2P55851 309 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TAS2R31P59538 309 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RPS23P62266 143 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 SRSF5Q13243 272 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 EBPQ15125 230 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 EXOSC6Q5RKV6 272 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ADGRE4PQ86SQ3 457 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ADIPOR2Q86V24 386 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RCBTB1Q8NDN9 531 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 TGM7Q96PF1 710 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF587Q96SQ5 575 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 RAB18Q9NP72 206 aa7.22□□□□□ -1.25
HMGXB4-202ENST00000418170 FITM1A5D6W6 292 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 OR2C1O95371 312 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 TSPAN15O95858 294 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 CST4P01036 141 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 CEACAM6P40199 344 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 CDKN2AP42771 156 aaKnown RBP7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 GUK1Q16774 197 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 GXYLT1Q4G148 440 aa7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 PARS2Q7L3T8 475 aaKnown RBP7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.21□□□□□ -1.25
HMGXB4-202ENST00000418170 COX18Q8N8Q8 333 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms