RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 BDH1Q02338 343 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ECH1Q13011 328 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 MRPL28Q13084 256 aaKnown RBP12.45□□□□□ -0.42
SF3B1-204ENST00000414963 HIKESHIQ53FT3 197 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ELFN2Q5R3F8 820 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 SYT6Q5T7P8 510 aaPredicted RBP12.45□□□□□ -0.42
SF3B1-204ENST00000414963 OR2G6Q5TZ20 316 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 TMEM154Q6P9G4 183 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF367Q7RTV3 350 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 WDR31Q8NA23 367 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 STEAP2Q8NFT2 490 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 NANOS1Q8WY41 292 aaKnown RBP12.45□□□□□ -0.42
SF3B1-204ENST00000414963 RORBQ92753 470 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 MUL1Q969V5 352 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 C4orf36Q96KX1 117 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 COG8Q96MW5 612 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 OR5M11Q96RB7 305 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 MROQ9BYG7 248 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 OR2H1Q9GZK4 316 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ISG20L2Q9H9L3 353 aaKnown RBP12.45□□□□□ -0.42
SF3B1-204ENST00000414963 ATPIF1Q9UII2 106 aa12.45□□□□□ -0.42
SF3B1-204ENST00000414963 OR6C6A6NF89 314 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 OR5H1A6NKK0 313 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 J3QLW9 94 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 SGCEO43556 437 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 RAD51DO75771 328 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 HLA-HP01893 362 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 LCKP06239 509 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 COX5BP10606 129 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF19P17023 458 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 ALDH3B2P48448 385 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 ASCL1P50553 236 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 BLMHQ13867 455 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 RAB35Q15286 201 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 KRTAP27-1Q3LI81 207 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 FDX2Q6P4F2 183 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 VASH1Q7L8A9 365 aaPredicted RBP12.44□□□□□ -0.42
SF3B1-204ENST00000414963 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 FAM169BQ8N8A8 192 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 SPRYD4Q8WW59 207 aaPredicted RBP12.44□□□□□ -0.42
SF3B1-204ENST00000414963 GATAD2BQ8WXI9 593 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 RNF166Q96A37 237 aaPredicted RBP12.44□□□□□ -0.42
SF3B1-204ENST00000414963 PELI1Q96FA3 418 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 COQ7Q99807 217 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 HDHD2Q9H0R4 259 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 WNT5BQ9H1J7 359 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 NIPAL2Q9H841 368 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 ELOVL3Q9HB03 270 aa12.44□□□□□ -0.42
SF3B1-204ENST00000414963 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
SF3B1-204ENST00000414963 ESPL1Q14674 2120 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF462Q96JM2 2506 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF503-AS2A6NEH8 195 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 C16orf97H3BN30 126 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 MAGEB4O15481 346 aaPredicted RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 SYNGR3O43761 229 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 INMTO95050 263 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 WNT11O96014 354 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 H2BFMP0C1H6 154 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 PATE4P0C8F1 98 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 IL32P24001 234 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 OTX1P32242 354 aaPredicted RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 UGT2B10P36537 528 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 RPL5P46777 297 aaKnown RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 TGM4P49221 684 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 RIDAP52758 137 aaKnown RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 UBE2NP61088 152 aaKnown RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 RAB1AP62820 205 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 GRB2P62993 217 aaKnown RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 FAM27E3Q08E93 113 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 MLLT11Q13015 90 aaPredicted RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 DOC2BQ14184 412 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 TSC22D1Q15714 1073 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 NEDD8Q15843 81 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 GSG1Q2KHT4 349 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
SF3B1-204ENST00000414963 CCDC58Q4VC31 144 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 TP53I3Q53FA7 332 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 PABPC1L2AQ5JQF8 200 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 TIMM23BQ5SRD1 257 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 LIPNQ5VXI9 398 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 LRRN1Q6UXK5 716 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 SSX8Q7RTT4 187 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 ALDH16A1Q8IZ83 802 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 OR1F12Q8NHA8 337 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 ZNF75AQ96N20 296 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 MGLLQ99685 303 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 RNF121Q9H920 327 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 CENPMQ9NSP4 180 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 GNG8Q9UK08 70 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 IKZF2Q9UKS7 526 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 FBXL3Q9UKT7 428 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 SLC5A6Q9Y289 635 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 AMDHD2Q9Y303 409 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 LRP12Q9Y561 859 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 FAM208BQ5VWN6 2430 aa12.43□□□□□ -0.42
SF3B1-204ENST00000414963 OGG1O15527 345 aa12.42□□□□□ -0.42
SF3B1-204ENST00000414963 SRSF10O75494 262 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms