RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZNF35P13682 527 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 APLNRP35414 380 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 HTR5AP47898 357 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 KRTAP10-9P60411 292 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 EIF2B1Q14232 305 aaKnown RBP26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 GGTLC2Q14390 218 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 MAD2L1BPQ15013 274 aaPredicted RBP26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 POM121L2Q96KW2 1035 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 AMELYQ99218 206 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 KCNS3Q9BQ31 491 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 ADGRL4Q9HBW9 690 aa26.48■■□□□ 1.83
CSNK1E-206ENST00000413574 C5orf49A4QMS7 147 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 PTHP01270 115 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 NUDT6P53370 316 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 ISL1P61371 349 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 RAB35Q15286 201 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 ELFN2Q5R3F8 820 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 MEDAGQ5VYS4 303 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 SPATC1Q76KD6 591 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 CDC20BQ86Y33 519 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 OR51G2Q8NGK0 314 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 OR1F12Q8NHA8 337 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 CNIH3Q8TBE1 160 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 ST7LQ8TDW4 575 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 RFKQ969G6 155 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 CNN2Q99439 309 aaKnown RBP26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 C1orf198Q9H425 327 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 CLN6Q9NWW5 311 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 WARS2Q9UGM6 360 aaKnown RBP26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 KLHDC2Q9Y2U9 406 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 ABCA12Q86UK0 2595 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 PLCE1Q9P212 2302 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 OR6C6A6NF89 314 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 WBP4O75554 376 aaKnown RBP26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 HGFACQ04756 655 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 SMN1Q16637 294 aaKnown RBP26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 TBC1D28Q2M2D7 210 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 SHFQ7M4L6 423 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 SLC16A9Q7RTY1 509 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 IL17RDQ8NFM7 739 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 AMBNQ9NP70 447 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 HAO2Q9NYQ3 351 aa26.47■■□□□ 1.83
CSNK1E-206ENST00000413574 DBHP09172 617 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 GDI2P50395 445 aaKnown RBP26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 IL18R1Q13478 541 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 USP51Q70EK9 711 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 OTOSQ8NHW6 89 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 AKAP1Q92667 903 aaKnown RBP eCLIP26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 ABHD6Q9BV23 337 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 CDH20Q9HBT6 801 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 POU2F3Q9UKI9 436 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 CACNA1DQ01668 2161 aa26.46■■□□□ 1.83
CSNK1E-206ENST00000413574 CSMD2Q7Z408 3487 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 KRT80Q6KB66 452 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 C8orf59Q8N0T1 100 aaPredicted RBP26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 SETD9Q8NE22 299 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 SLAMF6Q96DU3 332 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 HDHD2Q9H0R4 259 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 OR51B6Q9H340 312 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 ATP23Q9Y6H3 246 aa26.45■■□□□ 1.82
CSNK1E-206ENST00000413574 SBK2P0C263 348 aa26.44■■□□□ 1.82
CSNK1E-206ENST00000413574 THEM6Q8WUY1 208 aa26.44■■□□□ 1.82
CSNK1E-206ENST00000413574 CENPMQ9NSP4 180 aa26.44■■□□□ 1.82
CSNK1E-206ENST00000413574 COPS3Q9UNS2 423 aa26.44■■□□□ 1.82
CSNK1E-206ENST00000413574 COX5BP10606 129 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 MTNR1AP48039 350 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 SNCBQ16143 134 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 RSPO1Q2MKA7 263 aaPredicted RBP26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 ZNF672Q499Z4 452 aaPredicted RBP26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 RFLNBQ8N5W9 214 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 OR4F15Q8NGB8 312 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 OR1J2Q8NGS2 313 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 RNFT2Q96EX2 444 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 ATF6BQ99941 703 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 TTTY10Q9BZA0 68 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 PLEKHF2Q9H8W4 249 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 RAI1Q7Z5J4 1906 aaPredicted RBP26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 ITPR2Q14571 2701 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 E7EQL1 145 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 FAM157BP0CG42 384 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 WNT5AP41221 380 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 SLC35F2Q8IXU6 374 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 Q96MT0 163 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 COQ7Q99807 217 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 YIPF3Q9GZM5 350 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 UBTD1Q9HAC8 227 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 LAMP5Q9UJQ1 280 aa26.43■■□□□ 1.82
CSNK1E-206ENST00000413574 LYNP07948 512 aa26.42■■□□□ 1.82
CSNK1E-206ENST00000413574 ALOX5APP20292 161 aa26.42■■□□□ 1.82
CSNK1E-206ENST00000413574 ZNF91Q05481 1191 aa26.42■■□□□ 1.82
CSNK1E-206ENST00000413574 NRGNQ92686 78 aa26.42■■□□□ 1.82
CSNK1E-206ENST00000413574 CISD1Q9NZ45 108 aaKnown RBP26.42■■□□□ 1.82
CSNK1E-206ENST00000413574 AKAP6Q13023 2319 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 ATP6V1E1P36543 226 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 GALK2Q01415 458 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 TMED1Q13445 227 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 VHLLQ6RSH7 139 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 ZNF101Q8IZC7 436 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 ZNF454Q8N9F8 522 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms