RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SPESP1Q6UW49 350 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 UQCC3Q6UW78 93 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM131AQ6UXB0 335 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 VITQ6UXI7 678 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 WASH2PQ6VEQ5 465 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 C3P1Q6ZMU1 363 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF730Q6ZMV8 503 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMEM91Q6ZNR0 172 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 RNF165Q6ZSG1 346 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM92BQ6ZTR7 304 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 AHSA2Q719I0 299 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 EIF3MQ7L2H7 374 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC16A13Q7RTY0 426 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 TSEN54Q7Z6J9 526 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SERINC5Q86VE9 423 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 KCNMB4Q86W47 210 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SBF2Q86WG5 1849 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZFAND4Q86XD8 727 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MISPQ8IVT2 679 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 STHQ8IWL8 128 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 GPD1LQ8N335 351 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 Q8N402 240 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 HDDC3Q8N4P3 179 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SPICQ8N5J4 248 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 LINC00612Q8N6U2 182 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MRPL43Q8N983 215 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 DNAAF3Q8N9W5 541 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 TTC29Q8NA56 475 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 COLGALT1Q8NBJ5 622 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM71CQ8NEG0 241 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR6C4Q8NGE1 309 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR52K2Q8NGK3 314 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR5M9Q8NGP3 310 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR13C5Q8NGS8 318 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 WDR36Q8NI36 951 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SMAP2Q8WU79 429 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 PCNPQ8WW12 178 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 HTR3CQ8WXA8 447 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 DTD2Q96FN9 168 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 PYURFQ96I23 114 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 GMPPAQ96IJ6 420 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 C2orf48Q96LS8 159 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 VAT1Q99536 393 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 TEAD3Q99594 435 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MGLLQ99685 303 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 CMSS1Q9BQ75 279 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 UTP23Q9BRU9 249 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZYG11BQ9C0D3 744 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MED28Q9H204 178 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ABCG8Q9H221 673 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MTIF3Q9H2K0 278 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 OR51J1Q9H342 316 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 RIBC2Q9H4K1 309 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 POMKQ9H5K3 350 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MTHFD2LQ9H903 347 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 IL1RL2Q9HB29 575 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SLC25A19Q9HC21 320 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MYOZ1Q9NP98 299 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ISYNA1Q9NPH2 558 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 NIT2Q9NQR4 276 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 HEBP1Q9NRV9 189 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 RBM22Q9NW64 420 aaKnown RBP eCLIP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 THUMPD1Q9NXG2 353 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ZNF226Q9NYT6 803 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 RCOR3Q9P2K3 495 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 SEC14L4Q9UDX3 406 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 MLXQ9UH92 298 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 TRMT112Q9UI30 125 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 PILRAQ9UKJ1 303 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 FBXL3Q9UKT7 428 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 DICER1Q9UPY3 1922 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 EXOGQ9Y2C4 368 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 CA5BQ9Y2D0 317 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 CARHSP1Q9Y2V2 147 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 STRAPQ9Y3F4 350 aaKnown RBP2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 ORC6Q9Y5N6 252 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 CSAG2Q9Y5P2 127 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 CLCA3PQ9Y6N3 262 aa2.04□□□□□ -2.08
HMGB3P2-201ENST00000411913 PRRC2AP48634 2157 aaKnown RBP2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 MYH9P35579 1960 aaKnown RBP2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 ITGB4P16144 1822 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 FOCADQ5VW36 1801 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 LOC100506127A0A0U1RQW1 187 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 A0A1B0GV90 55 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 LOC285095A0A1B0GVY8 99 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM240BA0A1B0GVZ2 78 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 A0A1W2PR80 420 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 TMEM218A2RU14 115 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 SRRM4A7MD48 611 aaKnown RBP2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 FAM220BPB1ANY3 271 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 NPIPB9F8W1W9 429 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 MKRN2OSH3BPM6 223 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 KCNK1O00180 336 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 TLR4O00206 839 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 RTCAO00442 366 aaKnown RBP2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 CXCR6O00574 342 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 CCSO14618 274 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 AZIN1O14977 448 aa2.03□□□□□ -2.08
HMGB3P2-201ENST00000411913 SURF4O15260 269 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms