RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 IGHV3OR16-13A0A075B7E8 117 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGLV3-32A0A0A0MS00 114 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGHV3-74A0A0B4J1X5 117 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRAV41A0A0B4J266 112 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TYW5A2RUC4 315 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 GAGE10A6NGK3 116 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZNF732B4DXR9 585 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TSPAN4O14817 238 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC25A17O43808 307 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 GRAP2O75791 330 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 ERC2-IT1O76042 136 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 NRASP01111 189 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 HRASP01112 189 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 KRASP01116 189 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGHV3-9P01782 118 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PDGFRBP09619 1106 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 RD3LP0DJH9 198 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 HOXB9P17482 250 aaPredicted RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 POLR2EP19388 210 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 FUT1P19526 365 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CPN2P22792 545 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PRSS3P35030 304 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 GTF2F1P35269 517 aaKnown RBP eCLIP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 STT3AP46977 705 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR1D4P47884 311 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CCNG1P51959 295 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 OAZ1P54368 228 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 AK2P54819 239 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CAV3P56539 151 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR12D2P58182 307 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TAS2R31P59538 309 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CNBPP62633 177 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 RAB1AP62820 205 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZNF117Q03924 483 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 WASHC5Q12768 1159 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PPP1R1AQ13522 171 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 BTG3Q14201 252 aaPredicted RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PDIA5Q14554 519 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 DMC1Q14565 340 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PARP6Q2NL67 630 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 DEFB136Q30KP8 78 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZNF404Q494X3 552 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 FAM229BQ4G0N7 80 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CEP55Q53EZ4 464 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CYBRD1Q53TN4 286 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SOHLH1Q5JUK2 328 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 DDX59Q5T1V6 619 aaKnown RBP eCLIP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 AVPI1Q5T686 147 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 GGNBP1Q5YKI7 109 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SIGIRRQ6IA17 410 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SNRNP48Q6IEG0 339 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CASC4Q6P4E1 433 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 XKRXQ6PP77 449 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 UMODL1-AS1Q8N2C9 162 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SCAIQ8N9R8 606 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SPRYD4Q8WW59 207 aaPredicted RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 MOAP1Q96BY2 351 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 NSUN4Q96CB9 384 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 GRAMD2BQ96HH9 432 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 GLT1D1Q96MS3 346 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 HIST1H2AAQ96QV6 131 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 RBP7Q96R05 134 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TWNKQ96RR1 684 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SECISBP2Q96T21 854 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 FMO2Q99518 471 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 BTBD10Q9BSF8 475 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 MARVELD1Q9BSK0 173 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 CHCHD7Q9BUK0 85 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRAIPQ9BWF2 469 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PECRQ9BY49 303 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SELENOIQ9C0D9 397 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 LINC00597Q9H2U6 94 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 TAF9BQ9HBM6 251 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 UFSP2Q9NUQ7 469 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 FBXO5Q9UKT4 447 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PSMD13Q9UNM6 376 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 FLVCR2Q9UPI3 526 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 MAPRE3Q9UPY8 281 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 EIF3LQ9Y262 564 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 ASF1AQ9Y294 204 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PCDHB7Q9Y5E2 793 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PCYT1BQ9Y5K3 369 aaPredicted RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 F11RQ9Y624 299 aaKnown RBP-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC22A7Q9Y694 548 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 OBSL1O75147 1896 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 ABCB11O95342 1321 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 PCDH11YQ9BZA8 1340 aa-2.18□□□□□ -2.76
RNU4-88P-201ENST00000411220 SMARCA2P51531 1590 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SIPA1L1O43166 1804 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGHV7-4-1A0A0J9YVY3 117 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR2AT4A6NND4 320 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 HSPB2A8KAH6 182 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 KLRF2D3W0D1 207 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 H3BMM5 538 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 BOLA2-SMG1P6H3BVE0 249 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 PEX7O00628 323 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 NME4O00746 187 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC16A6O15403 523 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 CHST10O43529 356 aa-2.19□□□□□ -2.76
RNU4-88P-201ENST00000411220 GNRH2O43555 120 aa-2.19□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms