RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 DMRTA2Q96SC8 542 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 NUDT16L1Q9BRJ7 211 aaKnown RBP14.94□□□□□ -0.02
LIMS2-208ENST00000410011 EMC9Q9Y3B6 208 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ADAM10O14672 748 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 SCGNO76038 276 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF823P16415 610 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 GSK3AP49840 483 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 EFNA3P52797 238 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 LIN54Q6MZP7 749 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 MDGA2Q7Z553 956 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 SLC25A42Q86VD7 318 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ZDHHC22Q8N966 263 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 OR51A2Q8NGJ7 313 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ST8SIA2Q92186 375 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ST8SIA4Q92187 359 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 PHYHIPLQ96FC7 376 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 FOXN4Q96NZ1 517 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 CMKLR1Q99788 373 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 RASL12Q9NYN1 266 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 CGGBP1Q9UFW8 167 aaPredicted RBP14.94□□□□□ -0.02
LIMS2-208ENST00000410011 ALPK2Q86TB3 2170 aa14.94□□□□□ -0.02
LIMS2-208ENST00000410011 LOC107986453A0A1B0GWG9 222 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 A0A1W2PR77 199 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 DCDC2BA2VCK2 349 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 C17orf51A8MQB3 221 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 GMFGO60234 142 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 IL2RAP01589 272 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 CTRB1P17538 263 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 HSD11B1P28845 292 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 NSDHLQ15738 373 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF260Q3ZCT1 412 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 OTPQ5XKR4 325 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 CTRB2Q6GPI1 263 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 PAPD4Q6PIY7 484 aaKnown RBP14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ASB10Q8WXI3 467 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 COQ3Q9NZJ6 369 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 FBLN5Q9UBX5 448 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 GDF2Q9UK05 429 aaPredicted RBP14.93□□□□□ -0.02
LIMS2-208ENST00000410011 KLK13Q9UKR3 277 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 TNFSF18Q9UNG2 199 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 REV3LO60673 3130 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 CPED1A4D0V7 1026 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 POM121CA8CG34 1229 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 MS4A18H0YCH9 400 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 M0QYG6 137 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ALOX12BO75342 701 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 WDPCPO95876 746 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 RLN2P04090 185 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 DAP3P51398 398 aaKnown RBP14.93□□□□□ -0.02
LIMS2-208ENST00000410011 HSD11B2P80365 405 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 RAB30Q15771 203 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 MS4A18Q3C1V0 323 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 VWA2Q5GFL6 755 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 C11orf87Q6NUJ2 197 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF813Q6ZN06 617 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 MOB3CQ70IA8 216 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF584Q8IVC4 421 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 PXT1Q8NFP0 134 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 MFSD8Q8NHS3 518 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ST8SIA1Q92185 356 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 KCNK17Q96T54 332 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 SLC6A7Q99884 636 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF304Q9HCX3 659 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 FANCFQ9NPI8 374 aa14.93□□□□□ -0.02
LIMS2-208ENST00000410011 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-208ENST00000410011 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-208ENST00000410011 RAB27BO00194 218 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 ZBTB25P24278 435 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 CD34P28906 385 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 BTN1A1Q13410 526 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 JMJD6Q6NYC1 403 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-208ENST00000410011 LRFN4Q6PJG9 635 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 ARSKQ6UWY0 536 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 TMED4Q7Z7H5 227 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 JAGN1Q8N5M9 183 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 RNF133Q8WVZ7 376 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 ZBTB8AQ96BR9 441 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 UQCC2Q9BRT2 126 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 PLEKHA6Q9Y2H5 1048 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 CACNA1CQ13936 2221 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 TMEM269A0A1B0GVZ9 245 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF217O75362 1048 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 SPDEFO95238 335 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 MPZL1O95297 269 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 CD27P26842 260 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 CD38P28907 300 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 SPOCK1Q08629 439 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 ZNF273Q14593 569 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 MELKQ14680 651 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 MOGAT2Q3SYC2 334 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 SYT13Q7L8C5 426 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 DCXRQ7Z4W1 244 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 PLPP5Q8NEB5 264 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 OR1J2Q8NGS2 313 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 SEMA5BQ9P283 1151 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 PISDQ9UG56 409 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 FBXL2Q9UKC9 423 aa14.92□□□□□ -0.02
LIMS2-208ENST00000410011 LMO7DNF2Z398 122 aa14.91□□□□□ -0.02
LIMS2-208ENST00000410011 SOX1O00570 391 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms