RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CDRT1O95170 752 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 UCHL1P09936 223 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SDC2P34741 201 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SOX6P35712 828 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 EIF2S3P41091 472 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 OPRL1P41146 370 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 KIR3DL2P43630 455 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 HIST1H3AP68431 136 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PMP22Q01453 160 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 RASGEF1BQ0VAM2 473 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 RIPPLY2Q5TAB7 128 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 HIST2H3PS2Q5TEC6 136 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 OTPQ5XKR4 325 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PAMR1Q6UXH9 720 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 LRRN1Q6UXK5 716 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 Q6ZS92 163 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 HIST2H3AQ71DI3 136 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 DCXRQ7Z4W1 244 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ADGRE4PQ86SQ3 457 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 STX12Q86Y82 276 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SIAH3Q8IW03 269 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PRSS35Q8N3Z0 413 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 OR10S1Q8NGN2 331 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 OR2G2Q8NGZ5 317 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 C4orf45Q96LM5 186 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 DCBLD2Q96PD2 775 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 MROQ9BYG7 248 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 LINC00470Q9BZP3 86 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 PPIL3Q9H2H8 161 aaKnown RBP4.88□□□□□ -1.63
EPHA4-202ENST00000409854 NELFAQ9H3P2 528 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ELOVL3Q9HB03 270 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 IKZF2Q9UKS7 526 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF281Q9Y2X9 895 aa4.88□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF407Q9C0G0 2248 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 TRAV1-2A0A0B4J238 106 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 A0A1W2PPL8 197 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 TMEM212A6NML5 194 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 AQP7O14520 342 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 GPR171O14626 319 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 DHHO43323 396 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SLC34A2O95436 690 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ETV6P41212 452 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 EIF2B2P49770 351 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RORCP51449 518 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF169Q14929 603 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 IGSF11Q5DX21 431 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RPUSD3Q6P087 351 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CATSPERDQ86XM0 798 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CCDC28AQ8IWP9 274 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 MFSD4AQ8N468 514 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZADH2Q8N4Q0 377 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 OR10H5Q8NGA6 315 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 OR6N1Q8NGY5 312 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ABHD3Q8WU67 409 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 PDCD1LG2Q9BQ51 273 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 DEFB127Q9H1M4 99 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SP140LQ9H930 580 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 PNRC2Q9NPJ4 139 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 PLEKHB1Q9UF11 243 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 MCTS1Q9ULC4 181 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 FRYQ5TBA9 3013 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 MED12LQ86YW9 2145 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 TFECO14948 347 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SHOXO15266 292 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SYNGR4O95473 234 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 PNPP00491 289 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 PDGFAP04085 211 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CLEC2LP0C7M8 214 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 MSR1P21757 451 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CDAP32320 146 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 BMXP51813 675 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RIDAP52758 137 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 MRPS34P82930 218 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ENDOGQ14249 297 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RNPS1Q15287 305 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ACSM3Q53FZ2 586 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZMAT1Q5H9K5 638 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 WDR38Q5JTN6 314 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CFAP77Q6ZQR2 320 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 LINGO2Q7L985 606 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 AAED1Q7RTV5 226 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 TPRA1Q86W33 373 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 LINC00346Q8IVM7 164 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 OR13C5Q8NGS8 318 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CPT1CQ8TCG5 803 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CHPT1Q8WUD6 406 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 S100ZQ8WXG8 99 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 BORCS5Q969J3 196 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SLAMF6Q96DU3 332 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 GON7Q9BXV9 100 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 C1orf198Q9H425 327 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 GP6Q9HCN6 339 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SNTG1Q9NSN8 517 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 EXTL2Q9UBQ6 330 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 GDF2Q9UK05 429 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF175Q9Y473 711 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms