RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 C4orf45Q96LM5 186 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 RBM4Q9BWF3 364 aaKnown RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 WDR76Q9H967 626 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 CMC2Q9NRP2 79 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 NDRG4Q9ULP0 352 aaKnown RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 ARFGEF3Q5TH69 2177 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 RTTNQ86VV8 2226 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 TMEM129A0AVI4 362 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 PRR23D1E9PI22 279 aaPredicted RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 TMCC2O75069 709 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 SNAP29O95721 258 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 PRR23D2P0DMB1 279 aaPredicted RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 NAT2P11245 290 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 PAICSP22234 425 aaKnown RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 CRISP1P54107 249 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 EFNB3Q15768 340 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 FAHD1Q6P587 224 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 SYNPRQ8TBG9 265 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 SLC25A40Q8TBP6 338 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 DUS3LQ96G46 650 aaKnown RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 CENPNQ96H22 339 aaPredicted RBP16.42■□□□□ 0.22
PPM1B-207ENST00000409486 DDOQ99489 341 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 TEX12Q9BXU0 123 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 GRIP2Q9C0E4 1043 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 RIBC2Q9H4K1 309 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 TAAR3PQ9P1P4 343 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 N6AMT1Q9Y5N5 214 aa16.42■□□□□ 0.22
PPM1B-207ENST00000409486 H7C417 338 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 PSKH1P11801 424 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 PAX1P15863 534 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 IGFBP5P24593 272 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 FMO3P31513 532 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 MPV17P39210 176 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 KLF3P57682 345 aaPredicted RBP16.41■□□□□ 0.22
PPM1B-207ENST00000409486 SELENOVP59797 346 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 PPP1CBP62140 327 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 TNK1Q13470 666 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 SNAPC1Q16533 368 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 KCNMB1Q16558 191 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 SLC18B1Q6NT16 456 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 ERI1Q8IV48 349 aaKnown RBP16.41■□□□□ 0.22
PPM1B-207ENST00000409486 BBS1Q8NFJ9 593 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 GJC3Q8NFK1 279 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 GTF3AQ92664 365 aaKnown RBP16.41■□□□□ 0.22
PPM1B-207ENST00000409486 ZMYND19Q96E35 227 aaPredicted RBP16.41■□□□□ 0.22
PPM1B-207ENST00000409486 DOK1Q99704 481 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 BCL2L14Q9BZR8 327 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 OR2J1Q9GZK6 312 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 POFUT1Q9H488 388 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 BARX1Q9HBU1 254 aaPredicted RBP16.41■□□□□ 0.22
PPM1B-207ENST00000409486 COMMD3-BMI1R4GMX3 469 aa16.41■□□□□ 0.22
PPM1B-207ENST00000409486 ITPR3Q14573 2671 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 RNF223E7ERA6 249 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 F5H5K5 113 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 H3BNX3 289 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 M0R233 179 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 SURF4O15260 269 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 SYNGR3O43761 229 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 BAG2O95816 211 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 GCH1P30793 250 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 ELFN2Q5R3F8 820 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 CPOQ8IVL8 374 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 OR6N2Q8NGY6 317 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 CIB1Q99828 191 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 SMR3AQ99954 134 aa16.4■□□□□ 0.22
PPM1B-207ENST00000409486 MAP1AP78559 2803 aaPredicted RBP16.4■□□□□ 0.22
PPM1B-207ENST00000409486 VPS13CQ709C8 3753 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 ZNF593O00488 134 aaPredicted RBP16.39■□□□□ 0.21
PPM1B-207ENST00000409486 HMGN1P05114 100 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 ERCC1P07992 297 aaPredicted RBP16.39■□□□□ 0.21
PPM1B-207ENST00000409486 GGT2P36268 569 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 EFNA4P52798 201 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 SLC25A1P53007 311 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 CDK5Q00535 292 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 PTGES3Q15185 160 aaKnown RBP16.39■□□□□ 0.21
PPM1B-207ENST00000409486 ARL9Q6T311 187 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 CLEC2AQ6UVW9 174 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 Q71RC1 249 aaPredicted RBP16.39■□□□□ 0.21
PPM1B-207ENST00000409486 DCXRQ7Z4W1 244 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 IPCEF1Q8WWN9 437 aaPredicted RBP16.39■□□□□ 0.21
PPM1B-207ENST00000409486 NMNAT2Q9BZQ4 307 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 RAB1BQ9H0U4 201 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 ELOVL3Q9HB03 270 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 HINT3Q9NQE9 182 aaKnown RBP16.39■□□□□ 0.21
PPM1B-207ENST00000409486 CENPMQ9NSP4 180 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 PTTG3PQ9NZH4 202 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 MED13LQ71F56 2210 aa16.39■□□□□ 0.21
PPM1B-207ENST00000409486 OR6C6A6NF89 314 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 PCSK6P29122 969 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 EPHA2P29317 976 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 NAA10P41227 235 aaPredicted RBP16.38■□□□□ 0.21
PPM1B-207ENST00000409486 ENTPD1P49961 510 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 PPOXP50336 477 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 PRSS12P56730 875 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 TAF13Q15543 124 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 ZNF718Q3SXZ3 478 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 ZFP1Q6P2D0 407 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 PRSS57Q6UWY2 283 aa16.38■□□□□ 0.21
PPM1B-207ENST00000409486 CXXC5Q7LFL8 322 aaKnown RBP16.38■□□□□ 0.21
PPM1B-207ENST00000409486 SNX33Q8WV41 574 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms