RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SPARCP09486 303 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 PATE4P0C8F1 98 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 CLUP10909 449 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF32P17041 273 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 CD40P25942 277 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ATP6V1E1P36543 226 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 CAPGP40121 348 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 VHLP40337 213 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ENTPD1P49961 510 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 CDH11P55287 796 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 IL5RAQ01344 420 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 BSPH1Q075Z2 132 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 POU4F2Q12837 409 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ENDOGQ14249 297 aaKnown RBP9.16□□□□□ -0.94
RPAIN-204ENST00000405578 TBC1D28Q2M2D7 210 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 TEX30Q5JUR7 227 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 AADACL4Q5VUY2 407 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ARL9Q6T311 187 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 SLC22A25Q6T423 547 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 UGT2A3Q6UWM9 527 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 C22orf34Q6ZV56 151 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 SHFQ7M4L6 423 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ERI1Q8IV48 349 aaKnown RBP9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 HTRA1Q92743 480 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 ZMYND19Q96E35 227 aaPredicted RBP9.16□□□□□ -0.94
RPAIN-204ENST00000405578 FBXO17Q96EF6 278 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 TEAD3Q99594 435 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 HCAR1Q9BXC0 346 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 PLEK2Q9NYT0 353 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 WARS2Q9UGM6 360 aaKnown RBP9.16□□□□□ -0.94
RPAIN-204ENST00000405578 POU2F3Q9UKI9 436 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 RNF115Q9Y4L5 304 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 SPEF1Q9Y4P9 236 aa9.16□□□□□ -0.94
RPAIN-204ENST00000405578 CUBNO60494 3623 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 IGHV1-18A0A0C4DH31 117 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 DEFB108AA8MXU0 73 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 M0R129 80 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF593O00488 134 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ABCD4O14678 606 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 SGCEO43556 437 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 MPZL1O95297 269 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 GPANK1O95872 356 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 IGLV1-44P01699 117 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 MMP7P09237 267 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 CECR9P0C854 216 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 STOMP27105 288 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 HTR1FP30939 366 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 GDI2P50395 445 aaKnown RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 EFNB1P98172 346 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 PSG4Q00888 419 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 GALK2Q01415 458 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 KRTAP1-1Q07627 177 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ECH1Q13011 328 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 RAB39AQ14964 217 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 SNCBQ16143 134 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 MEP1BQ16820 701 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 PABPC1L2AQ5JQF8 200 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 SLC25A30Q5SVS4 291 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 NCMAPQ5T1S8 102 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 SEZ6L2Q6UXD5 910 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 C8orf59Q8N0T1 100 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 SLC30A7Q8NEW0 376 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 BBS1Q8NFJ9 593 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 OR6N2Q8NGY6 317 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 NRG4Q8WWG1 115 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 IPCEF1Q8WWN9 437 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 PIGTQ969N2 578 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 CNN2Q99439 309 aaKnown RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 HDHD2Q9H0R4 259 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 CDH20Q9HBT6 801 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 MRPL22Q9NWU5 206 aaKnown RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF224Q9NZL3 707 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 NPAP1Q9NZP6 1156 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 EIF3KQ9UBQ5 218 aaKnown RBP9.15□□□□□ -0.94
RPAIN-204ENST00000405578 CYB5R1Q9UHQ9 305 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ATPIF1Q9UII2 106 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 TMEM14AQ9Y6G1 99 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 COMMD3-BMI1R4GMX3 469 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 HSPE1-MOB4S4R3N1 261 aa9.15□□□□□ -0.94
RPAIN-204ENST00000405578 ZNF503-AS2A6NEH8 195 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 OR6C6A6NF89 314 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 DPRXA6NFQ7 191 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 E9PQ18 207 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 DLGAP1O14490 977 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 DOK2O60496 412 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 IFNA2P01563 188 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 SCG5P05408 212 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 COX5BP10606 129 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF14P17017 642 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-204ENST00000405578 SLC15A1P46059 708 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 HTR5AP47898 357 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 NUDT6P53370 316 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 ADARB1P78563 741 aaKnown RBP9.14□□□□□ -0.95
RPAIN-204ENST00000405578 NAAAQ02083 359 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 RAB35Q15286 201 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 TAF13Q15543 124 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 OCLNQ16625 522 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms