RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 ZHX1-C8orf76Q96EF9 292 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 AIFM2Q9BRQ8 373 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 ABHD6Q9BV23 337 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 FGF20Q9NP95 211 aaPredicted RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 COQ3Q9NZJ6 369 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 MCTS1Q9ULC4 181 aaKnown RBP10.3□□□□□ -0.76
SKA3-203ENST00000400018 RASD1Q9Y272 281 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 PCDHGB6Q9Y5F9 930 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 LHFPL6Q9Y693 200 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 AKAP6Q13023 2319 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 SHANK1Q9Y566 2161 aa10.3□□□□□ -0.76
SKA3-203ENST00000400018 ESPL1Q14674 2120 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 SHISA3A0PJX4 238 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 B3GALNT1O75752 331 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 NCR1O76036 304 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 IGHA1P01876 353 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 APEHP13798 732 aaKnown RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 CAPZA2P47755 286 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 WNT4P56705 351 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 HIKESHIQ53FT3 197 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 SFRP5Q5T4F7 317 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 METAP1DQ6UB28 335 aaPredicted RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 FAM180AQ6UWF9 173 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 MCEMP1Q8IX19 187 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 RAB2BQ8WUD1 216 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 FBXO17Q96EF6 278 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 CDADC1Q9BWV3 514 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 SLC22A1O15245 554 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 IGHMP01871 453 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 HLA-HP01893 362 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 GAAP10253 952 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 CLK1P49759 484 aaKnown RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 GLO1Q04760 184 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 MRPL49Q13405 166 aaKnown RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 SYT6Q5T7P8 510 aaPredicted RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 LIPNQ5VXI9 398 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 PHC2Q8IXK0 858 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 OR5H6Q8NGV6 325 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 MS4A3Q96HJ5 214 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 OPN3Q9H1Y3 402 aaPredicted RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 ELOVL3Q9HB03 270 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 ABCB10Q9NRK6 738 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 CAB39Q9Y376 341 aaPredicted RBP10.29□□□□□ -0.76
SKA3-203ENST00000400018 PCDHGB7Q9Y5F8 929 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 FAM215AQ9Y5M1 114 aa10.29□□□□□ -0.76
SKA3-203ENST00000400018 CENPEQ02224 2701 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 SCO1O75880 301 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 IGHG3P01860 377 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 PIPP12273 146 aaPredicted RBP10.28□□□□□ -0.76
SKA3-203ENST00000400018 SPNP16150 400 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 SOX2P48431 317 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 HSF2Q03933 536 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 HNRNPA0Q13151 305 aaKnown RBP10.28□□□□□ -0.76
SKA3-203ENST00000400018 GALEQ14376 348 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 SLC25A47Q6Q0C1 308 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 ADCK1Q86TW2 530 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 ATCAYQ86WG3 371 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 MND1Q9BWT6 205 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 NOX3Q9HBY0 568 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 CCNB1IP1Q9NPC3 277 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 FOXD3Q9UJU5 478 aaPredicted RBP10.28□□□□□ -0.76
SKA3-203ENST00000400018 MRPS18CQ9Y3D5 142 aaKnown RBP10.28□□□□□ -0.76
SKA3-203ENST00000400018 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 ALOX5APP20292 161 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 CCNOP22674 350 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 IL32P24001 234 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 MAP2K6P52564 334 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 SLC25A1P53007 311 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 PER3P56645 1201 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 FABP5Q01469 135 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 CDK10Q15131 360 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 IGFBP7Q16270 282 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 CTF1Q16619 201 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 IDO2Q6ZQW0 420 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 CDC20BQ86Y33 519 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 MFSD4AQ8N468 514 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 KLHL36Q8N4N3 616 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 YIPF6Q96EC8 236 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 SP140LQ9H930 580 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 TIGARQ9NQ88 270 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 PKDREJQ9NTG1 2253 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 CSMD1Q96PZ7 3565 aa10.28□□□□□ -0.76
SKA3-203ENST00000400018 A8MV72 311 aaPredicted RBP10.27□□□□□ -0.76
SKA3-203ENST00000400018 F5H5K5 113 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 DHHO43323 396 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 KHDRBS3O75525 346 aaKnown RBP10.27□□□□□ -0.76
SKA3-203ENST00000400018 RAD51DO75771 328 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 ACTL6AO96019 429 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 ZNF823P16415 610 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 AGTR1P30556 359 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 GFRALQ6UXV0 394 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 GLB1L2Q8IW92 636 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 ZNF100Q8IYN0 542 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 GPR137CQ8N3F9 429 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 SVOPQ8N4V2 548 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 DMRTB1Q96MA1 342 aa10.27□□□□□ -0.76
SKA3-203ENST00000400018 GPR137Q96N19 417 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms