RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 MCHR2Q969V1 340 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZMYND19Q96E35 227 aaPredicted RBP11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZNF582Q96NG8 517 aaPredicted RBP11.85□□□□□ -0.51
SEC13-205ENST00000397101 TSSK2Q96PF2 358 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 PIMREGQ9BSJ6 248 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 SEC61A2Q9H9S3 476 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 SCN3BQ9NY72 215 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 FKBP7Q9Y680 259 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZNF587BE7ETH6 402 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 UPK3AO75631 287 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 ZNF432O94892 652 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 CLUP10909 449 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 SPI1P17947 270 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 APOBEC3AP31941 199 aaPredicted RBP11.84□□□□□ -0.51
SEC13-205ENST00000397101 NTF4P34130 210 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 SLC25A1P53007 311 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 C6orf141Q5SZD1 244 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 TSPO2Q5TGU0 170 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 FBXW9Q5XUX1 488 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 C12orf54Q6X4T0 127 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 IL17RELQ6ZVW7 336 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 MEPCEQ7L2J0 689 aaKnown RBP11.84□□□□□ -0.51
SEC13-205ENST00000397101 ABHD12BQ7Z5M8 362 aaPredicted RBP11.84□□□□□ -0.51
SEC13-205ENST00000397101 TMEM123Q8N131 208 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 POMGNT2Q8NAT1 580 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 PTP4A1Q93096 173 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 FOXN4Q96NZ1 517 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 HCAR1Q9BXC0 346 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 MRPL13Q9BYD1 178 aaKnown RBP11.84□□□□□ -0.51
SEC13-205ENST00000397101 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.84□□□□□ -0.51
SEC13-205ENST00000397101 B9D1Q9UPM9 204 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
SEC13-205ENST00000397101 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
SEC13-205ENST00000397101 LOC390937A0A1W2PQ73 354 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 SLC22A31A6NKX4 558 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 PRODHO43272 600 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 DHHO43323 396 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 GABRB1P18505 474 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 EDNRAP25101 427 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 EFNB1P98172 346 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
SEC13-205ENST00000397101 SPOCK1Q08629 439 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 DBPQ10586 325 aaPredicted RBP11.83□□□□□ -0.52
SEC13-205ENST00000397101 GGTLC2Q14390 218 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 SMN1Q16637 294 aaKnown RBP11.83□□□□□ -0.52
SEC13-205ENST00000397101 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 CR1LQ2VPA4 569 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 SLC35D3Q5M8T2 416 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 PHYHD1Q5SRE7 291 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 C9orf135Q5VTT2 229 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 AADACL4Q5VUY2 407 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 OR7E24Q6IFN5 339 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 OR6V1Q8N148 313 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 APH1BQ8WW43 257 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 HTRA1Q92743 480 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 ALKBH3Q96Q83 286 aaPredicted RBP11.83□□□□□ -0.52
SEC13-205ENST00000397101 LINC00470Q9BZP3 86 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 CRLF2Q9HC73 371 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 GPR35Q9HC97 309 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 AMBNQ9NP70 447 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 SLC7A10Q9NS82 523 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 TAS2R16Q9NYV7 291 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 MOKQ9UQ07 419 aa11.83□□□□□ -0.52
SEC13-205ENST00000397101 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
SEC13-205ENST00000397101 MEGF8Q7Z7M0 2845 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 A0A0A6YYJ9 748 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 TVP23AA6NH52 213 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 WBP4O75554 376 aaKnown RBP11.82□□□□□ -0.52
SEC13-205ENST00000397101 GLCEO94923 617 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 TGFAP01135 160 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 CTLA4P16410 223 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 ZNF823P16415 610 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 EEF1B2P24534 225 aaKnown RBP11.82□□□□□ -0.52
SEC13-205ENST00000397101 GSTT1P30711 240 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 HTR1FP30939 366 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 COMPP49747 757 aaPredicted RBP11.82□□□□□ -0.52
SEC13-205ENST00000397101 BLVRAP53004 296 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 CSNK2BP67870 215 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 TEKQ02763 1124 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 SGCAQ16586 387 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 CEACAM16Q2WEN9 425 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 SLC25A30Q5SVS4 291 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 SLC25A47Q6Q0C1 308 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 OR52N5Q8NH56 324 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 RNFT2Q96EX2 444 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 DDOQ99489 341 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 TEAD3Q99594 435 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 NMNAT2Q9BZQ4 307 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 UBAP1Q9NZ09 502 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 MALT1Q9UDY8 824 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 WARS2Q9UGM6 360 aaKnown RBP11.82□□□□□ -0.52
SEC13-205ENST00000397101 BLOC1S6Q9UL45 172 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 POLR1DQ9Y2S0 133 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 TPRKBQ9Y3C4 175 aa11.82□□□□□ -0.52
SEC13-205ENST00000397101 IGKV1D-43A0A0B4J1Z2 117 aa11.81□□□□□ -0.52
SEC13-205ENST00000397101 CIB4A0PJX0 185 aa11.81□□□□□ -0.52
SEC13-205ENST00000397101 PTGES3LE9PB15 166 aa11.81□□□□□ -0.52
SEC13-205ENST00000397101 SLC1A7O00341 560 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms