RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 A0A0J9YY10 115 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 A0A1B0GX12 115 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 CCDC85CA6NKD9 419 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 GLSO94925 669 aaPredicted RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 CCNOP22674 350 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 GABRR1P24046 479 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 SNRPEP62304 92 aaKnown RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 TMEM225Q6GV28 225 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 TSLPQ969D9 159 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 KISS1RQ969F8 398 aaPredicted RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 S100PBPQ96BU1 408 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 NPAS1Q99742 590 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 HHLA2Q9UM44 414 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 TRAV1-2A0A0B4J238 106 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 OIP5O43482 229 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 TGM6O95932 706 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 ADRA2CP18825 462 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 SERPINA2P20848 420 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 RBMXP38159 391 aaKnown RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 BDH1Q02338 343 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 PPP1R1AQ13522 171 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 TOMM34Q15785 309 aaPredicted RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 ACKR1Q16570 336 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 STPG1Q5TH74 334 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 FJX1Q86VR8 437 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 ZNF649Q9BS31 505 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 MRPS18AQ9NVS2 196 aaKnown RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
NFKB1-202ENST00000394820 CNOT1A5YKK6 2376 aaKnown RBP11.94□□□□□ -0.5
NFKB1-202ENST00000394820 ANKRD20A5PA0PJZ0 165 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ZNF264O43296 627 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 FAM157BP0CG42 384 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 TGIF1Q15583 401 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 MEX3BQ6ZN04 569 aaKnown RBP11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ANGPTL5Q86XS5 388 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 OR2L13Q8N349 312 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 OR4K15Q8NH41 348 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ENTPD2Q9Y5L3 495 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 CTAG2O75638 210 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 THBS1P07996 1170 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 CPT2P23786 658 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 RAB5BP61020 215 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 VWA2Q5GFL6 755 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 SLC25A30Q5SVS4 291 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ZNF660Q6AZW8 331 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ALKBH2Q6NS38 261 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 STX12Q86Y82 276 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 SUMF1Q8NBK3 374 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-202ENST00000394820 CCDC74AQ96AQ1 378 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 BIN3Q9NQY0 253 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-202ENST00000394820 KIF25Q9UIL4 384 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 KIF26AQ9ULI4 1882 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-202ENST00000394820 LOC100289279A0A1B0GTE1 492 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 RHPN2P1A8MT19 583 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 NME2P1O60361 137 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 CNR1P21554 472 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 CHRFAM7AQ494W8 412 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 SLC16A9Q7RTY1 509 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 KCNRGQ8N5I3 272 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 BCORP1Q8N888 145 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 NPEPL1Q8NDH3 523 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 OR4K17Q8NGC6 315 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 OR14A16Q8NHC5 309 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
NFKB1-202ENST00000394820 RBM7Q9Y580 266 aaKnown RBP11.93□□□□□ -0.5
NFKB1-202ENST00000394820 G3V3Y1 287 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 H0YIG0 161 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 GALR3O60755 368 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 SCGNO76038 276 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 TSPAN15O95858 294 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 IGKV1D-16P01601 117 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 OR13C7P0DN81 318 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 GFERP55789 205 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 RPS27AP62979 156 aaKnown RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 UBA52P62987 128 aaKnown RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 ACY1Q03154 408 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 CD226Q15762 336 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 SLC22A18ASQ8N1D0 253 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 CA13Q8N1Q1 262 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 BAHD1Q8TBE0 780 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 KCNMB2Q9Y691 235 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 H7C417 338 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 LMX1BO60663 402 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 TUBG1P23258 451 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 PSG6Q00889 435 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 TLE3Q04726 772 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 GLO1Q04760 184 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 PDCD1Q15116 288 aa11.92□□□□□ -0.5
NFKB1-202ENST00000394820 USF2Q15853 346 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 MAMDC2Q7Z304 686 aaPredicted RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 CPEB2Q7Z5Q1 589 aaKnown RBP11.92□□□□□ -0.5
NFKB1-202ENST00000394820 ZNF321PQ8N8H1 164 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms