RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 TNFSF14O43557 240 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 SLC2A1P11166 492 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 NKX2-5P52952 324 aaPredicted RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 GP2P55259 537 aaKnown RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 PLK3Q9H4B4 646 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 LANCL2Q9NS86 450 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 TAS2R4Q9NYW5 299 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 ALG1L2C9J202 215 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 PPP3CBP16298 524 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 RAD52P43351 418 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 C12orf73Q69YU5 71 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 VN1R4Q7Z5H5 301 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 METTL17Q9H7H0 456 aaPredicted RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 P4HTMQ9NXG6 502 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 MTCH2Q9Y6C9 303 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 SLC2A10O95528 541 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 FAPQ12884 760 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 ZNF321PQ8N8H1 164 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 SEH1LQ96EE3 360 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 SIGLEC11Q96RL6 698 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 RIMS4Q9H426 269 aaPredicted RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 SERPINA7P05543 415 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 PLA2G7Q13093 441 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 PRICKLE4Q2TBC4 344 aa13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 WDR74Q6RFH5 385 aaPredicted RBP13.08□□□□□ -0.32
PPARGC1B-203ENST00000394320 HBE1P02100 147 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 IGFBP1P08833 259 aaPredicted RBP13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CD1EP15812 388 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 NOXO1Q8NFA2 376 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CDX2Q99626 313 aaPredicted RBP13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ZNF649Q9BS31 505 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 C11orf54Q9H0W9 315 aaPredicted RBP13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 FBXO8Q9NRD0 319 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 MED29Q9NX70 200 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CGGBP1Q9UFW8 167 aaPredicted RBP13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 NDRG3Q9UGV2 375 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ZNF391Q9UJN7 358 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 NEU3Q9UQ49 428 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 SLC5A6Q9Y289 635 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ELK1P19419 428 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CD79BP40259 229 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 PCK2Q16822 640 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ZNF718Q3SXZ3 478 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 DTWD2Q8NBA8 298 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 OR6K3Q8NGY3 331 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ERVMER34-1Q9H9K5 563 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 GPR84Q9NQS5 396 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 GPX5O75715 221 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 FOLR1P15328 257 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 KITLGP21583 273 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CASP3P42574 277 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 RAB11AP62491 216 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 AQP6Q13520 282 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ELFN2Q5R3F8 820 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 CD276Q5ZPR3 534 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 ANKRD37Q7Z713 158 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 OR4A16Q8NH70 328 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 GALNT9Q9HCQ5 603 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 MMP25Q9NPA2 562 aa13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 FAM212BQ9NTI7 297 aaPredicted RBP13.07□□□□□ -0.32
PPARGC1B-203ENST00000394320 LILRB5O75023 590 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 IGHV3-9P01782 118 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 HMGA2P52926 109 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 S100A12P80511 92 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 SORDQ00796 357 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 AGERQ15109 404 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 HEPHL1Q6MZM0 1159 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 TMEM179BQ7Z7N9 219 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 ASPDHA6ND91 283 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 SH2D1BO14796 132 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 MOSPD3O75425 235 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 NRASP01111 189 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 SSBP1Q04837 148 aaKnown RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 ASAH1Q13510 395 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 EIF4EBP2Q13542 120 aaPredicted RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 RNPS1Q15287 305 aaKnown RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 ZNF141Q15928 474 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 CD300LDQ6UXZ3 194 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 LYSMD2Q8IV50 215 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 NUBPLQ8TB37 319 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 DUSP15Q9H1R2 295 aaPredicted RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 GPR173Q9NS66 373 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 EXO1Q9UQ84 846 aaKnown RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 TNS1Q9HBL0 1735 aaKnown RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 POLR2AP24928 1970 aaKnown RBP13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 SHOXO15266 292 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 GUSBP08236 651 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 EDDM3BP56851 147 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 OR1C1Q15619 314 aa13.06□□□□□ -0.32
PPARGC1B-203ENST00000394320 RNLSQ5VYX0 342 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms