RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 SNTB2Q13425 540 aaKnown RBP13.37□□□□□ -0.27
GPC3-202ENST00000394299 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 ADPRHL1Q8NDY3 354 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 NCKAP5O14513 1909 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 A0A087WZY1 265 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 TTRP02766 147 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 TCRBP04435 133 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 P04436 131 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 RFC3P40938 356 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 TAS2R20P59543 309 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 RSPO4Q2I0M5 234 aaPredicted RBP13.36□□□□□ -0.27
GPC3-202ENST00000394299 FGGYQ96C11 551 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 THOC3Q96J01 351 aaKnown RBP13.36□□□□□ -0.27
GPC3-202ENST00000394299 CMTM3Q96MX0 182 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 CACNG6Q9BXT2 260 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 C1orf198Q9H425 327 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 HHLA2Q9UM44 414 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 PCDHGA5Q9Y5G8 931 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 A0A0A6YYJ9 748 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 GSTZ1O43708 216 aaPredicted RBP13.36□□□□□ -0.27
GPC3-202ENST00000394299 PMS2P2O95744 297 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 MT-CO3P00414 261 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 IGHEP01854 428 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 ACSM4P0C7M7 580 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 HLA-DMAP28067 261 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 DLSTP36957 453 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 SGCAQ16586 387 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 DMRTC1Q5HYR2 192 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 OR10K2Q6IF99 312 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 CREB3L2Q70SY1 520 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 CAPSLQ8WWF8 208 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 FAM3DQ96BQ1 224 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 ZNF837Q96EG3 531 aaPredicted RBP13.36□□□□□ -0.27
GPC3-202ENST00000394299 NKIRAS2Q9NYR9 191 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
GPC3-202ENST00000394299 EP300Q09472 2414 aaPredicted RBP13.36□□□□□ -0.27
GPC3-202ENST00000394299 PCNX2A6NKB5 2137 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 C5orf63A6NC05 138 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 SMLR1H3BR10 107 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 CTDSPLO15194 276 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 TRAPPC6AO75865 159 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 HPP00738 406 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 IGFBP3P17936 291 aaPredicted RBP13.35□□□□□ -0.27
GPC3-202ENST00000394299 NTF4P34130 210 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 SELENOPP49908 381 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 B3GALT5-AS1P59052 145 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 SPEM2Q0P670 501 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 WIPI1Q5MNZ9 446 aaPredicted RBP13.35□□□□□ -0.27
GPC3-202ENST00000394299 RNF144BQ7Z419 303 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 NAA40Q86UY6 237 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 ARMC10Q8N2F6 343 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 BEST4Q8NFU0 473 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 OR14L1PQ8NHC6 308 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 CREB3L1Q96BA8 519 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 ZNF486Q96H40 463 aaPredicted RBP13.35□□□□□ -0.27
GPC3-202ENST00000394299 SGCZQ96LD1 299 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 PBOV1Q9GZY1 135 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 TP63Q9H3D4 680 aaPredicted RBP13.35□□□□□ -0.27
GPC3-202ENST00000394299 MCUBQ9NWR8 336 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 FLVCR2Q9UPI3 526 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 MEIS3P1A6NDR6 274 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 ICAM2P13598 275 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 ZNF24P17028 368 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 MMP16P51512 607 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 SUCLG1P53597 346 aaKnown RBP13.35□□□□□ -0.27
GPC3-202ENST00000394299 GALK2Q01415 458 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 GUCA2AQ02747 115 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 CHAF1BQ13112 559 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 ZNF239Q16600 458 aaKnown RBP13.35□□□□□ -0.27
GPC3-202ENST00000394299 ZFP69Q49AA0 526 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 CDCP2Q5VXM1 449 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 OR6N1Q8NGY5 312 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 OR2AJ1Q8NGZ0 328 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 SLC25A28Q96A46 364 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 LOXL4Q96JB6 756 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 EDEM2Q9BV94 578 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 GLTPQ9NZD2 209 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 IL17BQ9UHF5 180 aa13.35□□□□□ -0.27
GPC3-202ENST00000394299 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
GPC3-202ENST00000394299 DMXL1Q9Y485 3027 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 TMEM272A0A1B0GTI8 110 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 LRRC3CA6NJW4 275 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 CTAG2O75638 210 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 CD2P06729 351 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 CD63P08962 238 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 RAB40ALP0C0E4 278 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 DCTDP32321 178 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 RCVRNP35243 200 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 RAC1P63000 192 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 IFITM2Q01629 132 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 RAB11BQ15907 218 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 FAM166AQ6J272 317 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 H3F3CQ6NXT2 135 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 DEGS2Q6QHC5 323 aa13.34□□□□□ -0.27
GPC3-202ENST00000394299 PLXDC2Q6UX71 529 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms