RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 HIST1H2BHQ93079 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NEIL2Q969S2 332 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ADAD1Q96M93 576 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CMKLR1Q99788 373 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BNQ99877 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BMQ99879 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 PDCD1LG2Q9BQ51 273 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NUDT9Q9BW91 350 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HCAR1Q9BXC0 346 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 SLC17A9Q9BYT1 436 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CHST6Q9GZX3 395 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 BRF2Q9HAW0 419 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 MARCH5Q9NX47 278 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 UTRNP46939 3433 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 A0A0D9SEW6 157 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3FA6NER0 549 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GPR89AB7ZAQ6 455 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR6A2O95222 327 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GYPBP06028 91 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 DBIP07108 87 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 SOD3P08294 240 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ADRA2AP08913 450 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GPR89BP0CG08 455 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TIMP2P16035 220 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TSFMP43897 325 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GABRA2P47869 451 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CLEC12BQ2HXU8 276 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 VITQ6UXI7 678 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 SLC16A14Q7RTX9 510 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GRINAQ7Z429 371 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 LYG2Q86SG7 212 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 PIANPQ8IYJ0 282 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR6T1Q8NGN1 323 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 UBE2E3Q969T4 207 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ZMYND19Q96E35 227 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GALNT14Q96FL9 552 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 IGSF21Q96ID5 467 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 BTF3L4Q96K17 158 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 WRAP53Q9BUR4 548 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR2J1Q9GZK6 312 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 PARP11Q9NR21 331 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 MTFP1Q9UDX5 166 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 KCND3Q9UK17 655 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3DA0A087WVF3 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3IA0A087WXS9 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3EA0A087X179 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3KA0A087X1G2 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3LB9A6J9 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CST4P01036 141 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR5G3P0C626 314 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GABRR1P24046 479 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 FCGR2CP31995 323 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 BMP8BP34820 402 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 KHKP50053 298 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 EFNB1P98172 346 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 AMZ1Q400G9 498 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 LRRC73Q5JTD7 316 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GPR157Q5UAW9 335 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3CQ6IPX1 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 RPL22L1Q6P5R6 122 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 Q6ZN92 141 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF573Q86YE8 665 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3Q8IZP1 549 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NECAP1Q8NC96 275 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR52N4Q8NGI2 321 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 IFI44Q8TCB0 444 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 RSPRY1Q96DX4 576 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 PRRC1Q96M27 445 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ADAM19Q9H013 955 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CAPN10Q9HC96 672 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HINT3Q9NQE9 182 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NCDNQ9UBB6 729 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CNTRLQ7Z7A1 2325 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 DRGXA6NNA5 263 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 KLK8O60259 260 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 STK17BO94768 372 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 IGHA1P01876 353 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CD74P04233 296 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 JMJD7P0C870 316 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TMIGD3P0DMS9 266 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CALCBP10092 127 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 MDKP21741 143 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 PMELP40967 661 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 LPAR6P43657 344 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CX3CR1P49238 355 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CEBPEQ15744 281 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 ADIRFQ15847 76 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 MDGA2Q7Z553 956 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 APCDD1Q8J025 514 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR51D1Q8NGF3 324 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR1P1Q8NH06 330 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 SPPL3Q8TCT6 385 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 LKAAEAR1Q8TD35 194 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 MIB2Q96AX9 1013 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms