RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 SAXO2Q658L1 398 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 C22orf42Q6IC83 251 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 NEGR1Q7Z3B1 354 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 MRPL55Q7Z7F7 128 aaKnown RBP2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 GTPBP8Q8N3Z3 284 aaPredicted RBP2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 CAPSLQ8WWF8 208 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 ESR2Q92731 530 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 TMEM230Q96A57 120 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 FAM192AQ9GZU8 254 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 ANKRA2Q9H9E1 313 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 NMRK1Q9NWW6 199 aa2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 CCDC59Q9P031 241 aaKnown RBP2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 RRP15Q9Y3B9 282 aaKnown RBP2.46□□□□□ -2.02
SNORA40.2-201ENST00000390847 EIF3HO15372 352 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 RRP8O43159 456 aaKnown RBP2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 ZNF207O43670 478 aaKnown RBP2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 CCNKO75909 580 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 YIF1AO95070 293 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 ARG1P05089 322 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 ERGP11308 486 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 ZNF14P17017 642 aaPredicted RBP2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 SLC11A1P49279 550 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 SP4Q02446 784 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 TGM3Q08188 693 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 IFT88Q13099 833 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 SELENBP1Q13228 472 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 SRSF5Q13243 272 aaKnown RBP2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 HSP90AB3PQ58FF7 597 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 UBE2UQ5VVX9 321 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 CARD17Q5XLA6 110 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 TMEM205Q6UW68 189 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 CMC1Q7Z7K0 106 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 WDFY1Q8IWB7 410 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 OR4K5Q8NGD3 323 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 APH1BQ8WW43 257 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 RMI2Q96E14 147 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 C20orf24Q9BUV8 137 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 VANGL2Q9ULK5 521 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 RABL2BQ9UNT1 228 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 NOTCH2Q04721 2471 aa2.45□□□□□ -2.02
SNORA40.2-201ENST00000390847 PCM1Q15154 2024 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 AKNAQ7Z591 1439 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 IGKV1D-17A0A075B6S4 117 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 TRAV19A0A0A6YYK7 116 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 A0A0U1RQV1 116 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 A0A1B0GW55 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 OR2AG2A6NM03 316 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 CCDC169A6NNP5 214 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 SMKR1H3BMG3 65 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 NDUFAB1O14561 156 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 BPY2O14599 106 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 H6PDO95479 791 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 IL4P05112 153 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DUX4L2P0CJ85 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DUX4L3P0CJ86 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DUX4L5P0CJ88 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DUX4L6P0CJ89 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DUX4L7P0CJ90 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 U2AF2P26368 475 aaKnown RBP eCLIP2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 OPRK1P41145 380 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 CHRNA6Q15825 494 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 PRSS8Q16651 343 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 TCEAL5Q5H9L2 206 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 CENPQQ7L2Z9 268 aaPredicted RBP2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 BHLHA15Q7RTS1 189 aaPredicted RBP2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 COX18Q8N8Q8 333 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 CHST4Q8NCG5 386 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 OR10AD1Q8NGE0 317 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 LYPD6BQ8NI32 183 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 NUBPLQ8TB37 319 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 TCEAL3Q969E4 200 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 PTX4Q96A99 478 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 ZNF488Q96MN9 340 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DOK1Q99704 481 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 HSD17B10Q99714 261 aaKnown RBP2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 FOXC2Q99958 501 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 RTBDNQ9BSG5 229 aaPredicted RBP2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 ZNF160Q9HCG1 818 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DUX4Q9UBX2 424 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 DOCK9Q9BZ29 2069 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 CAMTA1Q9Y6Y1 1673 aa2.44□□□□□ -2.02
SNORA40.2-201ENST00000390847 TRBV11-1A0A0K0K1C0 115 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 AP3B1O00203 1094 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 NVLO15381 856 aaKnown RBP2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 ERLIN1O75477 346 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 CLDN11O75508 207 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 IGKV1-17P01599 117 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 IGLV3-19P01714 112 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 HLA-DQA1P01909 254 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 KRT14P02533 472 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 SERPINE2P07093 398 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 MYL2P10916 166 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 GTF2E2P29084 291 aaKnown RBP2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 RGS8P57771 180 aaPredicted RBP2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 CACNG7P62955 275 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 LRRC74AQ0VAA2 488 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 CDC20Q12834 499 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 AVPI1Q5T686 147 aa2.43□□□□□ -2.02
SNORA40.2-201ENST00000390847 AP1ARQ63HQ0 302 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms