RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SLC9A5Q14940 896 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ELOCQ15369 112 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 RAB11BQ15907 218 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZNF141Q15928 474 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZNF77Q15935 545 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PCK2Q16822 640 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PRICKLE4Q2TBC4 344 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 NDUFAF6Q330K2 333 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 C2orf76Q3KRA6 126 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 LRRC37A5PQ49AS3 106 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SLC22A6Q4U2R8 563 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 TRMT12Q53H54 448 aaKnown RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 MESTQ5EB52 335 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 C9orf64Q5T6V5 341 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PRAMEF17Q5VTA0 474 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 AWAT2Q6E213 333 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR10K2Q6IF99 312 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZNF529Q6P280 563 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PRSS54Q6PEW0 395 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 C11orf88Q6PI97 169 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 FIGNL1Q6PIW4 674 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PAPD4Q6PIY7 484 aaKnown RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 CRIP3Q6Q6R5 217 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 NPSR1Q6W5P4 371 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 MED25Q71SY5 747 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 MAMDC2Q7Z304 686 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ADGRE4PQ86SQ3 457 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 LHFPL1Q86WI0 220 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 CATSPERDQ86XM0 798 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 FAM219AQ8IW50 185 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SLC39A11Q8N1S5 342 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 GTPBP8Q8N3Z3 284 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 BPIFB2Q8N4F0 458 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ARHGEF39Q8N4T4 335 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 RCBTB1Q8NDN9 531 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 TMEM52Q8NDY8 209 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR2L3Q8NG85 312 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR4S1Q8NGB4 309 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR4E2Q8NGC2 313 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR51A2Q8NGJ7 313 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR9A4Q8NGU2 314 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR51F2Q8NH61 342 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR4C6Q8NH72 309 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR5AK2Q8NH90 309 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZNF563Q8TA94 476 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 NT5CQ8TCD5 201 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ADAMTS15Q8TE58 950 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 RHBDD1Q8TEB9 315 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 CYB5D2Q8WUJ1 264 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SLC25A43Q8WUT9 341 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SNX33Q8WV41 574 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 RNF141Q8WVD5 230 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 LCN9Q8WX39 176 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ASB17Q8WXJ9 295 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 RSC1A1Q92681 617 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PMM1Q92871 262 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 GAL3ST3Q96A11 431 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PTX4Q96A99 478 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZBTB8AQ96BR9 441 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 C8orf44Q96CB5 159 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 FOXRED1Q96CU9 486 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 MUCL1Q96DR8 90 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 TM4SF19Q96DZ7 209 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 CPNE2Q96FN4 548 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SCARF2Q96GP6 870 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SEC22AQ96IW7 307 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 KIRREL1Q96J84 757 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PTCHD1Q96NR3 888 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ASB16Q96NS5 453 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 GNRHR2Q96P88 292 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 IP6K3Q96PC2 410 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 TSSK2Q96PF2 358 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 OR8B4Q96RC9 309 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ELF4Q99607 663 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 CDC6Q99741 560 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 KLHDC3Q9BQ90 382 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 WDR77Q9BQA1 342 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SOX7Q9BT81 388 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 LMF2Q9BU23 707 aaKnown RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 NUDT9Q9BW91 350 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SLC46A2Q9BY10 475 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 TRIM2Q9C040 744 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 SLITRK2Q9H156 845 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 CHMP1AQ9HD42 196 aaPredicted RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PARP11Q9NR21 331 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 MRPL22Q9NWU5 206 aaKnown RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 UPB1Q9UBR1 384 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 DNAJB11Q9UBS4 358 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 FBLN5Q9UBX5 448 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 IL36AQ9UHA7 158 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 LSM7Q9UK45 103 aaKnown RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 ZDHHC8Q9ULC8 765 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 HIF3AQ9Y2N7 669 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 AMDHD2Q9Y303 409 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 NOP16Q9Y3C1 178 aaKnown RBP3.09□□□□□ -1.91
TRAV39-201ENST00000390466 HS3ST3B1Q9Y662 390 aa3.09□□□□□ -1.91
TRAV39-201ENST00000390466 KPTNQ9Y664 436 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms